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71_007_scaffold_62

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Displaying items 1-30 of 142 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_62_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..166
DNA (165bp) protein (55aa)
50S ribosomal protein L20 n=1 Tax=Escherichia coli P0304799.3 RepID=N3Q5V1_ECOLX
rplT; 50S ribosomal subunit protein L20; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
71_007_scaffold_62_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


617..1600
DNA (984bp) protein (328aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
Phenylalanine--tRNA ligase alpha subunit n=395 Tax=Enterobacteriaceae RepID=SYFA_ECO24
71_007_scaffold_62_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1615..4002
DNA (2388bp) protein (796aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=204 Tax=Enterobacteriaceae RepID=SYFB_SHISS
71_007_scaffold_62_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4346..5326
DNA (981bp) protein (327aa)
Vitamin B12 import system permease protein BtuC n=136 Tax=Escherichia coli RepID=BTUC_ECO24
btuC; vtamin B12-transporter permease; K06073 vitamin B12 transport system permease protein
Vitamin B12 import system permease protein BtuC {ECO:0000256|HAMAP-Rule:MF_01004, ECO:0000256|SAAS:SAAS00165801}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_62_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5389..5940
DNA (552bp) protein (184aa)
btuE; glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=464 Tax=Enterobacteriaceae RepID=J7R532_ECOLX
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_007_scaffold_62_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5940..6689
DNA (750bp) protein (250aa)
btuD; vitamin B12-transporter ATPase (EC:3.6.3.33); K06074 vitamin B12 transport system ATP-binding protein [EC:3.6.3.33]
Vitamin B12 import ATP-binding protein BtuD {ECO:0000256|HAMAP-Rule:MF_01005}; EC=3.6.3.33 {ECO:0000256|HAMAP-Rule:MF_01005};; Vitamin B12-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01005}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Vitamin B12 import ATP-binding protein BtuD n=598 Tax=Enterobacteriaceae RepID=BTUD_ECO24
71_007_scaffold_62_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6767..7231
DNA (465bp) protein (155aa)
Lipoprotein n=670 Tax=Enterobacteriaceae RepID=C3T7U7_ECOLX
nlpC; putative lipoprotein; K13695 probable lipoprotein NlpC
NLP/P60 protein {ECO:0000313|EMBL:ADX50683.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
71_007_scaffold_62_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7478..8191
DNA (714bp) protein (238aa)
Uncharacterized protein n=22 Tax=Escherichia coli RepID=B3IJN2_ECOLX
Cyclic di-GMP regulator CdgR {ECO:0000313|EMBL:EMX49796.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
hypothetical protein
71_007_scaffold_62_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8254..9690
DNA (1437bp) protein (479aa)
UPF0061 protein YdiU n=7 Tax=Escherichia coli RepID=D6HXI9_ECOLX
UPF0061 protein YdiU {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
hypothetical protein; K08997 hypothetical protein
71_007_scaffold_62_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9694..9885)
DNA (192bp) protein (64aa)
Uncharacterized protein YdiE n=756 Tax=Enterobacteriaceae RepID=YDIE_ECO57
ydiE; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHW17692.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_007_scaffold_62_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10017..11063)
DNA (1047bp) protein (349aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
3-deoxy-7-phosphoheptulonate synthase n=54 Tax=Escherichia coli RepID=U9YAZ0_ECOLX
71_007_scaffold_62_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11220..12053)
DNA (834bp) protein (278aa)
Phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
Phosphoenolpyruvate synthase regulatory protein n=1208 Tax=Enterobacteriaceae RepID=PSRP_ECO24
ydiA; hypothetical protein; K09773 hypothetical protein
71_007_scaffold_62_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12386..14764
DNA (2379bp) protein (793aa)
pps; phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2]
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Phosphoenolpyruvate synthase n=440 Tax=Enterobacteriaceae RepID=PPSA_ECOLI
71_007_scaffold_62_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14821..16467)
DNA (1647bp) protein (549aa)
ydiD; short chain acyl-CoA synthetase; K12507 acyl-CoA synthetase [EC:6.2.1.-]
Short chain acyl-CoA synthetase, anaerobic n=77 Tax=Enterobacteriaceae RepID=B7L6H4_ECO55
Short chain acyl-CoA synthetase {ECO:0000313|EMBL:EFE62333.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_007_scaffold_62_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16524..16817)
DNA (294bp) protein (98aa)
Uncharacterized protein n=792 Tax=Enterobacteriaceae RepID=C3T7Y2_ECOLX
ydiT; putative 4Fe-4S ferredoxin-type oxidoreductase subunit
Uncharacterized protein {ECO:0000313|EMBL:EFK02397.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
71_007_scaffold_62_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16814..18103)
DNA (1290bp) protein (430aa)
Oxidoreductase n=60 Tax=Enterobacteriaceae RepID=J9ZJR6_ECO14
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AKE84192.1}; TaxID=1048254 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 str. C227-11.;"
71_007_scaffold_62_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18159..19097)
DNA (939bp) protein (313aa)
Electron transfer flavoprotein alpha subunit n=234 Tax=Enterobacteriaceae RepID=C6ECQ9_ECOBD
electron transfer flavoprotein subunit YdiR
Electron transfer flavodomain protein {ECO:0000313|EMBL:ENA08124.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
71_007_scaffold_62_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19117..19881)
DNA (765bp) protein (255aa)
Electron transfer flavoprotein beta subunit n=62 Tax=Enterobacteriaceae RepID=D6HXI0_ECOLX
Electron transfer flavodomain protein {ECO:0000313|EMBL:KEO00994.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
hypothetical protein
71_007_scaffold_62_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19918..20094
DNA (177bp) protein (59aa)
Uncharacterized protein n=966 Tax=Enterobacteriaceae RepID=A7ZMG2_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZK23065.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
71_007_scaffold_62_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20197..21108
DNA (912bp) protein (304aa)
Transcriptional regulator, AraC family n=39 Tax=Enterobacteriaceae RepID=B3HFS6_ECOLX
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ESA66589.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
ydiP; putative transcriptional regulator YdiP
71_007_scaffold_62_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21151..22110)
DNA (960bp) protein (320aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Salmonella enterica subsp. enterica serovar Montevideo str. ATCC BAA710 RepID=G9TSL6_SALMO
ydiO; putative acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EZE19717.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
71_007_scaffold_62_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22207..22581)
DNA (375bp) protein (125aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Acetate CoA-transferase YdiF n=1 Tax=Escherichia coli 3030-1 RepID=G1ZJA5_ECOLX
acetyl-CoA: acetoacetyl-CoA transferase subunit alpha/beta
71_007_scaffold_62_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22616..23704)
DNA (1089bp) protein (363aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
Acetate CoA-transferase YdiF n=3 Tax=Shigella RepID=I6BY28_SHIFL
ydiF; fused acetyl-CoA: acetoacetyl-CoA transferase: alpha subunit/beta subunit
71_007_scaffold_62_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23848..24606)
DNA (759bp) protein (253aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307
3-dehydroquinate dehydratase n=185 Tax=Enterobacteriaceae RepID=AROD_ECOSE
71_007_scaffold_62_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24637..25503)
DNA (867bp) protein (289aa)
ydiB; quinate/shikimate dehydrogenase; K05887 quinate/shikimate dehydrogenase [EC:1.1.1.282]
Quinate/shikimate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; EC=1.1.1.282 {ECO:0000256|HAMAP-Rule:MF_01578};; NAD-dependent shikimate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
Quinate/shikimate dehydrogenase n=299 Tax=Enterobacteriaceae RepID=YDIB_ECO55
71_007_scaffold_62_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25515..26780)
DNA (1266bp) protein (422aa)
Major Facilitator Superfamily protein n=37 Tax=Escherichia coli RepID=G1YAB8_ECOLX
Inner membrane transport protein ydiN {ECO:0000313|EMBL:KEO00987.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
ydiN; transporter
71_007_scaffold_62_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26998..28230)
DNA (1233bp) protein (411aa)
Inner membrane transporter ydiM n=4 Tax=Escherichia coli RepID=D6HXH3_ECOLX
Transporter {ECO:0000313|EMBL:KDV28598.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
transporter
71_007_scaffold_62_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28330..28686)
DNA (357bp) protein (119aa)
Uncharacterized protein YdiL n=292 Tax=Enterobacteriaceae RepID=YDIL_ECOLI
ydiL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEN98797.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
71_007_scaffold_62_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29115..30227)
DNA (1113bp) protein (371aa)
UPF0118 inner membrane protein YdiK n=662 Tax=Enterobacteriaceae RepID=YDIK_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMV60770.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
71_007_scaffold_62_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32131..33543
DNA (1413bp) protein (471aa)
Putative oxidase n=1 Tax=Escherichia coli TA271 RepID=F4UQ90_ECOLX
FAD linked oxidase protein {ECO:0000313|EMBL:ESD67143.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
putative oxidase; K06911
Displaying items 1-30 of 142 in total

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