ggKbase home page

71_007_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 51 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_172_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207..941)
DNA (735bp) protein (245aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EHU14187.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EHU14187.1};; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1059 Tax=Enterobacteriaceae RepID=FABG_ECOLI
71_007_scaffold_172_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(954..1883)
DNA (930bp) protein (310aa)
fabD; acyl carrier protein S-malonyltransferase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
Malonyl CoA-acyl carrier protein transacylase n=873 Tax=Enterobacteriaceae RepID=FABD_ECOL6
71_007_scaffold_172_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1899..2852)
DNA (954bp) protein (318aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1048 Tax=Enterobacteriaceae RepID=FABH_ECO24
71_007_scaffold_172_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2920..3960)
DNA (1041bp) protein (347aa)
plsX; glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
Phosphate acyltransferase n=97 Tax=Enterobacteriaceae RepID=PLSX_SHIF8
71_007_scaffold_172_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4276..4797)
DNA (522bp) protein (174aa)
Uncharacterized protein YceD n=1275 Tax=Enterobacteriaceae RepID=YCED_ECO57
yceD; hypothetical protein; K07040 uncharacterized protein
YceD protein {ECO:0000313|EMBL:EFE63618.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_007_scaffold_172_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4957..5580
DNA (624bp) protein (208aa)
Maf-like protein YceF n=5 Tax=Shigella flexneri RepID=D2ACU5_SHIF2
yceF; Maf-like protein
Maf-like protein YceF {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
71_007_scaffold_172_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5692..6651)
DNA (960bp) protein (320aa)
rluC; 23S rRNA pseudouridylate synthase C; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
Ribosomal large subunit pseudouridine synthase C n=676 Tax=Enterobacteriaceae RepID=RLUC_ECOLI
71_007_scaffold_172_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7224..8438
DNA (1215bp) protein (405aa)
rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
Ribonuclease E n=2 Tax=Escherichia coli RepID=M8W6R5_ECOLX
71_007_scaffold_172_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8431..10326
DNA (1896bp) protein (632aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E n=2 Tax=Escherichia coli RepID=L3EGQ9_ECOLX
71_007_scaffold_172_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10522..11475)
DNA (954bp) protein (318aa)
Flagellar hook-associated protein 3 n=157 Tax=Escherichia coli RepID=A7ZZ41_ECOHS
flgL; flagellar hook-filament junction protein FlgL; K02397 flagellar hook-associated protein 3 FlgL
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:EGP25675.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
71_007_scaffold_172_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11487..13130)
DNA (1644bp) protein (548aa)
Flagellar hook-associated protein FlgK n=5 Tax=Escherichia coli RepID=I0VNY9_ECOLX
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:EID65855.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
flgK; flagellar hook-filament junction protein FlgK; K02396 flagellar hook-associated protein 1 FlgK
71_007_scaffold_172_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13196..14137)
DNA (942bp) protein (314aa)
Peptidoglycan hydrolase FlgJ n=456 Tax=Enterobacteriaceae RepID=FLGJ_ECOLI
flgJ; muramidase; K02395 flagellar protein FlgJ
Flagellar rod assembly protein/muramidase FlgJ {ECO:0000313|EMBL:EFE63612.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_007_scaffold_172_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14137..15234)
DNA (1098bp) protein (366aa)
Flagellar P-ring protein n=651 Tax=Enterobacteriaceae RepID=FLGI_ECO24
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
71_007_scaffold_172_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15246..15944)
DNA (699bp) protein (233aa)
Flagellar L-ring protein n=1099 Tax=Enterobacteriaceae RepID=FLGH_ECO24
flgH; flagellar basal body L-ring protein; K02393 flagellar L-ring protein precursor FlgH
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
71_007_scaffold_172_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15997..16779)
DNA (783bp) protein (261aa)
Flagellar basal-body rod protein FlgG n=1339 Tax=Enterobacteriaceae RepID=FLGG_ECO57
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:KDU30478.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
71_007_scaffold_172_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16951..17706)
DNA (756bp) protein (252aa)
Flagellar basal-body rod protein FlgF n=14 Tax=Escherichia coli RepID=B1IV25_ECOLC
flgF; flagellar basal body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:KKB14904.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_172_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17726..18601)
DNA (876bp) protein (292aa)
Flagellar hook protein flgE n=1 Tax=Escherichia coli EPECa12 RepID=I6GBK9_ECOLX
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE
Flagellar hook protein FlgE {ECO:0000313|EMBL:EZD25884.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_007_scaffold_172_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18626..18907)
DNA (282bp) protein (94aa)
Flagellar hook protein flgE n=1 Tax=Escherichia coli MP021017.9 RepID=M8MPK2_ECOLX
flgE; flagellar hook protein FlgE
Flagellar hook protein flgE {ECO:0000313|EMBL:EOV80563.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
71_007_scaffold_172_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18932..19627)
DNA (696bp) protein (232aa)
Basal-body rod modification protein FlgD n=377 Tax=Enterobacteriaceae RepID=FLGD_ECOLI
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
Flagellar hook capping protein {ECO:0000313|EMBL:EII49249.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
71_007_scaffold_172_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19639..20043)
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgC n=1344 Tax=Enterobacteriaceae RepID=FLGC_ECO57
flgC; flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
71_007_scaffold_172_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20047..20463)
DNA (417bp) protein (139aa)
Flagellar basal body rod protein FlgB n=904 Tax=Enterobacteriaceae RepID=FLGB_ECOL6
flgB; flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
71_007_scaffold_172_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20619..21278
DNA (660bp) protein (220aa)
Flagella basal body P-ring formation protein FlgA n=2 Tax=Escherichia coli RepID=U9XIC3_ECOLX
flgA; flagellar basal body P-ring biosynthesis protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_007_scaffold_172_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21354..21647
DNA (294bp) protein (98aa)
Negative regulator of flagellin synthesis n=508 Tax=Enterobacteriaceae RepID=FLGM_ECOLI
flgM; anti-sigma28 factor FlgM; K02398 negative regulator of flagellin synthesis FlgM
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:KDY97146.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
71_007_scaffold_172_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21652..22068
DNA (417bp) protein (139aa)
FlgN protein n=35 Tax=Escherichia coli RepID=D8E3D4_ECOLX
FlgN protein {ECO:0000313|EMBL:EFK47517.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
FlgN family protein; K02399 flagella synthesis protein FlgN
71_007_scaffold_172_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22108..23643)
DNA (1536bp) protein (512aa)
Virulence factor mviN homolog n=701 Tax=Enterobacteriaceae RepID=E2QKF3_ECOLX
yceN; hypothetical protein; K03980 virulence factor
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
71_007_scaffold_172_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23753..24676)
DNA (924bp) protein (308aa)
Oxidoreductase family, NAD-binding Rossmann fold protein n=2 Tax=Escherichia coli RepID=I0VNX4_ECOLX
Oxidoreductase family, NAD-binding Rossmann fold protein {ECO:0000313|EMBL:EID65840.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
putative oxidoreductase; K03810 virulence factor
71_007_scaffold_172_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24678..25325)
DNA (648bp) protein (216aa)
UPF0502 protein YceH n=8 Tax=Escherichia coli RepID=D8EL78_ECOLX
UPF0502 protein YceH {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
hypothetical protein; K09915 hypothetical protein
71_007_scaffold_172_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25336..25920)
DNA (585bp) protein (195aa)
rimJ; ribosomal-protein-S5-alanine N-acetyltransferase (EC:2.3.1.128); K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EMV63074.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EMV63074.1};; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Ribosomal-protein-alanine acetyltransferase n=935 Tax=Enterobacteriaceae RepID=RIMJ_ECO57
71_007_scaffold_172_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26156..27364
DNA (1209bp) protein (403aa)
Multidrug resistance protein MdtH n=85 Tax=Enterobacteriaceae RepID=MDTH_ECO55
multidrug resistance protein MdtH
Multidrug resistance protein MdtH {ECO:0000256|HAMAP-Rule:MF_01529, ECO:0000256|SAAS:SAAS00016561}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
71_007_scaffold_172_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27428..28075
DNA (648bp) protein (216aa)
Glutaredoxin-2 n=1113 Tax=Enterobacteriaceae RepID=GLRX2_ECO57
glutaredoxin; K03675 glutaredoxin 2
Glutaredoxin-2 {ECO:0000313|EMBL:ELE02101.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Displaying items 1-30 of 51 in total

View Taxonomy