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71_007_scaffold_178

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Displaying items 1-30 of 148 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_178_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1176)
DNA (1176bp) protein (392aa)
Major sodium/proline symporter n=271 Tax=Enterobacteriaceae RepID=J7QPL1_ECOLX
putP; sodium/proline symporter; K11928 sodium/proline symporter
Sodium/proline symporter {ECO:0000313|EMBL:ELC99032.1}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
71_007_scaffold_178_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1599..3326
DNA (1728bp) protein (576aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EFO58560.1}; EC=1.2.1.88 {ECO:0000313|EMBL:EFO58560.1};; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 145-7.;"
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Escherichia coli EC4100B RepID=E7UK23_ECOLX
71_007_scaffold_178_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3284..5545
DNA (2262bp) protein (754aa)
Bifunctional protein putA {ECO:0000313|EMBL:EZJ78299.1}; EC=1.2.1.88 {ECO:0000313|EMBL:EZJ78299.1};; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
putA; fused PutA transcriptional repressor / proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.99.8 1.5.1.12)
PutA protein n=3 Tax=Escherichia coli RepID=S1ID90_ECOLX
71_007_scaffold_178_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5585..6223)
DNA (639bp) protein (213aa)
Pyrimidine utilization regulatory protein R n=46 Tax=Escherichia coli RepID=D6HV62_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:KDV38621.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
RutR transcriptional dual regulator
71_007_scaffold_178_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6511..7602
DNA (1092bp) protein (364aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Pyrimidine monooxygenase RutA n=86 Tax=Enterobacteriaceae RepID=RUTA_ECO24
monooxygenase of the alternative pyrimidine degradation pathway
71_007_scaffold_178_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7599..8294
DNA (696bp) protein (232aa)
isochorismatase hydrolase; K09020 ureidoacrylate peracid hydrolase [EC:3.5.1.110]
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023142}; EC=3.5.1.110 {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023120};; Ureidoacrylate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_00830}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB n=105 Tax=Escherichia coli RepID=RUTB_ECOBD
71_007_scaffold_178_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8306..8692
DNA (387bp) protein (129aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023348}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023353};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
Putative aminoacrylate peracid reductase RutC n=10 Tax=Escherichia coli RepID=T7XDS3_ECOLX
endoribonuclease L-PSP; K09021 aminoacrylate peracid reductase
71_007_scaffold_178_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8700..9500
DNA (801bp) protein (267aa)
acetyltransferase; K09023 aminoacrylate hydrolase [EC:3.5.1.-]
Putative aminoacrylate hydrolase RutD {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023219}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023215};; Aminohydrolase {ECO:0000256|HAMAP-Rule:MF_00832}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Putative aminoacrylate hydrolase RutD n=133 Tax=Enterobacteriaceae RepID=RUTD_ECO55
71_007_scaffold_178_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9510..10100
DNA (591bp) protein (197aa)
hypothetical protein; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
Probable malonic semialdehyde reductase RutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.1.1.298 {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
Probable malonic semialdehyde reductase RutE n=171 Tax=Escherichia coli RepID=RUTE_ECO24
71_007_scaffold_178_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10111..10605
DNA (495bp) protein (165aa)
pyrimidine utilization flavin reductase protein F; K09024 flavin reductase [EC:1.5.1.-]
FMN reductase (NADH) RutF {ECO:0000256|HAMAP-Rule:MF_00833}; EC=1.5.1.42 {ECO:0000256|HAMAP-Rule:MF_00833};; FMN reductase {ECO:0000256|HAMAP-Rule:MF_00833}; NADH-flavin reductase RutF {ECO:0000256|HAMAP-Rule:MF_00833}; NADH:flavin oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00833}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
FMN reductase (NADH) RutF n=2 Tax=Enterobacteriaceae RepID=F4NDK4_9ENTR
71_007_scaffold_178_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10626..11954
DNA (1329bp) protein (443aa)
Pyrimidine utilization transporter G n=35 Tax=Escherichia coli RepID=D6HV55_ECOLX
Pyrimidine utilization transport protein G {ECO:0000313|EMBL:ESC90492.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
purine permease ycdG; K09016 putative pyrimidine permease RutG
71_007_scaffold_178_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12037..12210)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3490-1 RepID=T9LX63_ECOLX
ymdF; hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EGI22367.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
71_007_scaffold_178_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12583..13179
DNA (597bp) protein (199aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
NAD(P)H dehydrogenase (quinone) n=1031 Tax=Enterobacteriaceae RepID=NQOR_ECO24
wrbA; Trp repressor binding protein WrbA; K03809 Trp repressor binding protein
71_007_scaffold_178_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13200..13427
DNA (228bp) protein (76aa)
Uncharacterized protein YccJ n=1422 Tax=Enterobacteriaceae RepID=YCCJ_ECO57
yccJ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK20823.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
71_007_scaffold_178_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13465..14670)
DNA (1206bp) protein (402aa)
agp; glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10); K01085 glucose-1-phosphatase [EC:3.1.3.10]
Glucose-1-phosphatase n=4 Tax=Escherichia coli RepID=I2RW84_ECOLX
Glucose-1-phosphatase {ECO:0000313|EMBL:ESA60843.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_007_scaffold_178_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14963..16219)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Escherichia coli 113303 RepID=U9XFK9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA60844.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
yccE; hypothetical protein
71_007_scaffold_178_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16467..17387
DNA (921bp) protein (307aa)
Curved DNA-binding protein n=105 Tax=Enterobacteriaceae RepID=CBPA_ECO24
cbpA; curved DNA-binding protein CbpA; K05516 curved DNA-binding protein
Curved DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_01154, ECO:0000256|SAAS:SAAS00010094}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
71_007_scaffold_178_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17387..17692
DNA (306bp) protein (102aa)
Chaperone modulatory protein CbpM n=14 Tax=Escherichia coli RepID=B3I7K0_ECOLX
cbpM; modulator of CbpA co-chaperone
Chaperone modulatory protein CbpM {ECO:0000256|HAMAP-Rule:MF_01155}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
71_007_scaffold_178_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17785..18384)
DNA (600bp) protein (200aa)
Chaperone protein TorD n=33 Tax=Escherichia coli RepID=TORD_ECO8A
torD; chaperone; K03533 TorA specific chaperone
Chaperone protein TorD {ECO:0000256|HAMAP-Rule:MF_01150, ECO:0000256|SAAS:SAAS00014573}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
71_007_scaffold_178_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18381..20927)
DNA (2547bp) protein (849aa)
torA; trimethylamine N-oxide (TMAO) reductase I, catalytic subunit (EC:1.6.6.9); K07811 trimethylamine-N-oxide reductase (cytochrome c) 1 [EC:1.7.2.3]
Trimethylamine N-oxide (TMAO) reductase I, catalytic subunit n=4 Tax=Escherichia coli RepID=B7M8Y0_ECO8A
Trimethylamine-N-oxide reductase TorA {ECO:0000313|EMBL:ESA60848.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_007_scaffold_178_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20927..22099)
DNA (1173bp) protein (391aa)
Cytochrome c-type protein TorC n=385 Tax=Enterobacteriaceae RepID=TORC_ECOLI
torC; trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit; K03532 trimethylamine-N-oxide reductase (cytochrome c) 1, cytochrome c-type subunit TorC
Trimethylamine-N-oxide reductase c-type cytochrome TorC {ECO:0000313|EMBL:EII22246.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
71_007_scaffold_178_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22229..22921
DNA (693bp) protein (231aa)
Response transcriptional regulator for torA (Sensor TorS) n=756 Tax=Enterobacteriaceae RepID=J7Q6W7_ECOLX
torR; torCAD operon transcriptional regulatory protein TorR; K07772 two-component system, OmpR family, torCAD operon response regulator TorR
Response regulator receiver domain protein {ECO:0000313|EMBL:EII22216.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
71_007_scaffold_178_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22894..23922)
DNA (1029bp) protein (343aa)
Periplasmic protein TorT n=145 Tax=Enterobacteriaceae RepID=A7ZK98_ECO24
torT; periplasmic sensory protein TorT; K11930 periplasmic protein TorT
Reductase {ECO:0000313|EMBL:EZE24915.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
71_007_scaffold_178_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24050..26749
DNA (2700bp) protein (900aa)
torS; hybrid sensory histidine kinase TorS; K07647 two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
Hybrid sensory histidine kinase in two-component regulatory system with TorR n=5 Tax=Escherichia coli RepID=B7M8X6_ECO8A
71_007_scaffold_178_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26821..27894
DNA (1074bp) protein (358aa)
4Fe-4S membrane protein n=9 Tax=Escherichia coli RepID=L3EFB8_ECOLX
yccM; putative 4Fe-4S membrane protein
Putative electron transport protein yccM {ECO:0000313|EMBL:EMX53470.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
71_007_scaffold_178_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27943..28116)
DNA (174bp) protein (58aa)
Protein GnsA n=1177 Tax=Enterobacteriaceae RepID=GNSA_ECOL6
GnsB protein
GnsA/GnsB family protein {ECO:0000313|EMBL:KEO36205.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
71_007_scaffold_178_27
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28510..28722)
DNA (213bp) protein (71aa)
Cold shock-like protein CspG n=1342 Tax=Enterobacteriaceae RepID=CSPG_ECO57
cspG; Cold shock-like protein cspG
Cold shock-like protein CspG {ECO:0000313|EMBL:AIL39913.1}; TaxID=1282358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri Shi06HN006.;"
71_007_scaffold_178_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29662..29967
DNA (306bp) protein (102aa)
Uncharacterized protein n=346 Tax=Enterobacteriaceae RepID=C3TFA2_ECOLX
ymcD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX32953.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
71_007_scaffold_178_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30074..30718
DNA (645bp) protein (215aa)
Outer membrane lipoprotein n=9 Tax=Escherichia coli RepID=L3EGH6_ECOLX
ymcC; putative outer membrane lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EMX53464.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
71_007_scaffold_178_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30715..31461
DNA (747bp) protein (249aa)
Uncharacterized protein GfcC n=257 Tax=Enterobacteriaceae RepID=GFCC_ECOLI
ymcB; group 4 capsule (G4C) polysaccharide, YmcB
Uncharacterized protein {ECO:0000313|EMBL:KEO26952.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
Displaying items 1-30 of 148 in total

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