ggKbase home page

71_007_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 60 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_204_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..850
DNA (849bp) protein (283aa)
tdcE; pyruvate formate-lyase 4/2-ketobutyrate formate-lyase; K00656 formate C-acetyltransferase [EC:2.3.1.54]
Formate acetyltransferase {ECO:0000313|EMBL:KEL69520.1}; EC=2.3.1.54 {ECO:0000313|EMBL:KEL69520.1};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
Formate acetyltransferase n=3 Tax=Shigella RepID=B2U0A2_SHIB3
71_007_scaffold_204_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

859..1998
DNA (1140bp) protein (380aa)
Formate C-acetyltransferase n=1 Tax=Escherichia coli 1.2264 RepID=I2SUJ5_ECOLX
tdcE; Keto-acid formate acetyltransferase
Formate acetyltransferase {ECO:0000313|EMBL:EFE61972.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_007_scaffold_204_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2112..2501
DNA (390bp) protein (130aa)
TdcF protein n=4 Tax=Escherichia coli RepID=D3QS56_ECOCB
hypothetical protein; K07567 TdcF protein
Uncharacterized protein {ECO:0000313|EMBL:CDK47898.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
71_007_scaffold_204_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2573..3937
DNA (1365bp) protein (455aa)
tdcG; L-serine dehydratase 3; K01752 L-serine dehydratase [EC:4.3.1.17]
L-serine ammonia-lyase {ECO:0000313|EMBL:KDW84443.1}; EC=4.3.1.17 {ECO:0000313|EMBL:KDW84443.1};; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L-serine ammonia-lyase tdcg n=13 Tax=Escherichia coli RepID=J7Q9V1_ECOLX
71_007_scaffold_204_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4212..5543
DNA (1332bp) protein (444aa)
Inner membrane transport protein YhaO n=500 Tax=Enterobacteriaceae RepID=YHAO_ECOLI
serine transporter
Membrane protein {ECO:0000313|EMBL:EZE31415.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
71_007_scaffold_204_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5571..6881
DNA (1311bp) protein (437aa)
UPF0597 protein YhaM n=282 Tax=Enterobacteriaceae RepID=YHAM_ECO24
yhaM; hypothetical protein
UPF0597 protein YhaM {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
71_007_scaffold_204_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7093..7257)
DNA (165bp) protein (55aa)
Uncharacterized protein n=985 Tax=Enterobacteriaceae RepID=C3STG2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK75416.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
71_007_scaffold_204_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7280..7981)
DNA (702bp) protein (234aa)
Uncharacterized protein n=103 Tax=Enterobacteriaceae RepID=J7R9A5_ECOLX
yhaK; pirin-related protein; K06911
Pirin {ECO:0000313|EMBL:EZA39050.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
71_007_scaffold_204_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8086..8982
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=859 Tax=Enterobacteriaceae RepID=A7ZRZ6_ECO24
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ESD69682.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
71_007_scaffold_204_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9033..9389)
DNA (357bp) protein (119aa)
Uncharacterized protein n=326 Tax=Enterobacteriaceae RepID=B7LH43_ECO55
hypothetical protein
Inner membrane protein yhaI {ECO:0000313|EMBL:KEJ44765.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
71_007_scaffold_204_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9631..9996)
DNA (366bp) protein (122aa)
Inner membrane protein YhaH n=976 Tax=Enterobacteriaceae RepID=YHAH_ECO57
hypothetical protein
Inner membrane protein YhaH {ECO:0000313|EMBL:EGI20164.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
71_007_scaffold_204_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10289..11275)
DNA (987bp) protein (329aa)
glutathione transferase (EC:2.5.1.18); K07393 putative glutathione S-transferase
Uncharacterized protein n=82 Tax=Escherichia coli RepID=A7ZRZ1_ECO24
Putative transferase {ECO:0000313|EMBL:AFH12944.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
71_007_scaffold_204_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11345..11827)
DNA (483bp) protein (161aa)
DoxX family protein n=258 Tax=Enterobacteriaceae RepID=E0IWN1_ECOLW
yqjF; hypothetical protein; K15977 putative oxidoreductase
Putative quinol oxidase subunit {ECO:0000313|EMBL:CEK06995.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
71_007_scaffold_204_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11923..12222)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1012 Tax=Enterobacteriaceae RepID=C3STJ2_ECOLX
hypothetical protein
YqjK-like family protein {ECO:0000313|EMBL:END51387.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
71_007_scaffold_204_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12212..12616)
DNA (405bp) protein (135aa)
Inner membrane protein YqjE n=4 Tax=Escherichia coli RepID=F4SNA1_ECOLX
hypothetical protein
Inner membrane protein yqjE {ECO:0000313|EMBL:EKJ13143.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
71_007_scaffold_204_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12619..12924)
DNA (306bp) protein (102aa)
Uncharacterized protein YqjD n=1358 Tax=Enterobacteriaceae RepID=YQJD_ECO57
yqjD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ13142.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
71_007_scaffold_204_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12962..13330)
DNA (369bp) protein (123aa)
Uncharacterized protein n=392 Tax=Enterobacteriaceae RepID=J7QW22_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ05779.1}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
71_007_scaffold_204_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13477..13860)
DNA (384bp) protein (128aa)
Inner membrane YqjA domain protein n=1 Tax=Escherichia coli BCE002_MS12 RepID=M8QF38_ECOLX
yqjB; hypothetical protein
Modulator protein MzrA {ECO:0000256|HAMAP-Rule:MF_00904}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
71_007_scaffold_204_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13864..14526)
DNA (663bp) protein (221aa)
Inner membrane protein YqjA n=1630 Tax=Enterobacteriaceae RepID=YQJA_ECO57
yqjA; hypothetical protein
Inner membrane protein YqjA {ECO:0000313|EMBL:EQP45877.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
71_007_scaffold_204_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14871..15647)
DNA (777bp) protein (259aa)
Exu regulon transcriptional regulator n=799 Tax=Enterobacteriaceae RepID=EXUR_ECO57
exuR; DNA-binding transcriptional repressor ExuR
FCD domain protein {ECO:0000313|EMBL:EII20878.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
71_007_scaffold_204_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15943..16659
DNA (717bp) protein (239aa)
Uncharacterized protein n=42 Tax=Enterobacteriaceae RepID=F4NI36_9ENTR
putative fimbrial protein
Fimbrial protein {ECO:0000313|EMBL:ETJ00959.1}; TaxID=1403944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_B_14.;"
71_007_scaffold_204_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16689..17189
DNA (501bp) protein (167aa)
CS1 type fimbrial major subunit n=395 Tax=Enterobacteriaceae RepID=B1IRM1_ECOLC
eafB; putative fimbrial subunit protein
CS1 type fimbrial major subunit {ECO:0000313|EMBL:EHX27408.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
71_007_scaffold_204_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17281..19965
DNA (2685bp) protein (895aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=B7LZZ9_ECO8A
Uncharacterized protein {ECO:0000313|EMBL:ETJ00957.1}; TaxID=1403944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_B_14.;"
hypothetical protein
71_007_scaffold_204_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19962..21050
DNA (1089bp) protein (363aa)
Uncharacterized protein n=288 Tax=Enterobacteriaceae RepID=B7LZZ8_ECO8A
minor pilin and initiator protein
CblD like pilus biogenesis initiator {ECO:0000313|EMBL:ESD69666.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
71_007_scaffold_204_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21138..22436)
DNA (1299bp) protein (433aa)
Transport of hexuronates n=38 Tax=Enterobacteriaceae RepID=J7QW17_ECOLX
hexuronate transporter ExuT
Hexuronate transporter {ECO:0000313|EMBL:EMU59141.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
71_007_scaffold_204_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22919..24331
DNA (1413bp) protein (471aa)
uxaC; glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
Uronate isomerase n=213 Tax=Enterobacteriaceae RepID=UXAC_ECO55
71_007_scaffold_204_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24346..24963
DNA (618bp) protein (206aa)
uxaA; altronate hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate hydrolase n=1 Tax=Escherichia coli HVH 114 (4-7037740) RepID=T6TT72_ECOLX
Altronate hydrolase {ECO:0000313|EMBL:EZD30993.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_007_scaffold_204_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24977..25570
DNA (594bp) protein (198aa)
uxaA; altronate hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate hydrolase n=1 Tax=Escherichia coli DEC6C RepID=H4VL62_ECOLX
SAF domain protein {ECO:0000313|EMBL:EFJ85983.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
71_007_scaffold_204_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25548..25757
DNA (210bp) protein (70aa)
uxaA; altronate hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate hydrolase n=1 Tax=Escherichia coli 2845350 RepID=M8ZJ55_ECOLX
Altronate hydrolase {ECO:0000313|EMBL:KHI36610.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_204_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25840..26391
DNA (552bp) protein (184aa)
Uncharacterized protein n=205 Tax=Enterobacteriaceae RepID=B6I462_ECOSE
ygjV; hypothetical protein
Inner membrane protein ygjV {ECO:0000313|EMBL:EGW88436.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
Displaying items 1-30 of 60 in total

View Taxonomy