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71_007_scaffold_256

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_256_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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56..625
DNA (570bp) protein (190aa)
Antitermination protein Q n=12 Tax=Enterobacteriaceae RepID=B2U016_SHIB3
antitermination protein Q
Phage antitermination protein {ECO:0000313|EMBL:EQP57032.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
71_007_scaffold_256_trna_1
unknown

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990..1062
DNA (73bp)
transferRNA Met
71_007_scaffold_256_trna_2
unknown

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1166..1239
DNA (74bp)
transferRNA Arg
71_007_scaffold_256_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2212..2640
DNA (429bp) protein (143aa)
Uncharacterized protein n=83 Tax=Enterobacteriaceae RepID=B6IA89_ECOSE
tolA; TolA protein (fragment) of prophage
TolA protein {ECO:0000313|EMBL:EGU95301.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
71_007_scaffold_256_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2791..3186
DNA (396bp) protein (132aa)
Uncharacterized protein n=128 Tax=Enterobacteriaceae RepID=B6IA90_ECOSE
hypothetical protein
TolA C-terminal family protein {ECO:0000313|EMBL:KEL77469.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
71_007_scaffold_256_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3438..3653
DNA (216bp) protein (72aa)
Conserved domain protein n=52 Tax=Enterobacteriaceae RepID=D5CWX4_ECOKI
hypothetical protein
Phage lysis protein {ECO:0000313|EMBL:ESP08898.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
71_007_scaffold_256_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3658..3969
DNA (312bp) protein (104aa)
Phage protein n=13 Tax=Escherichia coli RepID=L3HJS9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHI92280.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
ydfR; Qin prophage hypothetical protein
71_007_scaffold_256_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3966..4499
DNA (534bp) protein (178aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
ydfQ; Qin prophage; lysozyme; K01185 lysozyme [EC:3.2.1.17]
Lysozyme n=69 Tax=Escherichia coli RepID=B3HJJ1_ECOLX
71_007_scaffold_256_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4496..4993
DNA (498bp) protein (166aa)
Uncharacterized protein n=90 Tax=Escherichia coli RepID=B7MNE9_ECO45
ydfP; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK01913.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
71_007_scaffold_256_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5354..5569
DNA (216bp) protein (72aa)
Cold shock-like protein CspI n=18 Tax=Escherichia coli RepID=L3HKR1_ECOLX
cspI; cold shock-like protein cspI; K03704 cold shock protein (beta-ribbon, CspA family)
Cold shock-like protein CspI {ECO:0000313|EMBL:EQY62467.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
71_007_scaffold_256_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5802..6071
DNA (270bp) protein (90aa)
Uncharacterized protein n=45 Tax=Escherichia RepID=B7MNF1_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR06164.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
71_007_scaffold_256_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6244..6417
DNA (174bp) protein (58aa)
GnsA/GnsB family protein n=2 Tax=Escherichia coli RepID=D7ZIZ0_ECOLX
gnsB; hypothetical protein
Gns {ECO:0000313|EMBL:EYZ90953.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
71_007_scaffold_256_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6713..6919
DNA (207bp) protein (69aa)
Uncharacterized protein n=96 Tax=Escherichia RepID=B7LNN8_ESCF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIG83164.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_256_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7481..8008
DNA (528bp) protein (176aa)
Prophage protein n=137 Tax=root RepID=E2QMB3_ECOLX
putative terminase small subunit
Gifsy-2 prophage {ECO:0000313|EMBL:EGI40721.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
71_007_scaffold_256_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8017..10116
DNA (2100bp) protein (700aa)
Phage DNA packaging protein n=18 Tax=Escherichia coli RepID=L3GKY7_ECOLX
DNA packaging protein {ECO:0000313|EMBL:EYZ90956.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
terminase large subunit
71_007_scaffold_256_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10113..10325
DNA (213bp) protein (71aa)
LF82 chromosome, complete sequence n=678 Tax=root RepID=E4UED6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD84173.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
71_007_scaffold_256_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10325..11800
DNA (1476bp) protein (492aa)
Lambda family phage portal protein n=4 Tax=Escherichia coli RepID=L4GC83_ECOLX
Portal protein {ECO:0000313|EMBL:EMD05011.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
portal protein
71_007_scaffold_256_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11778..13805
DNA (2028bp) protein (676aa)
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Escherichia coli RepID=L3HJR8_ECOLX
gifsy-2 prophage Clp protease-like protein
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
71_007_scaffold_256_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13892..14215
DNA (324bp) protein (108aa)
Uncharacterized protein n=9 Tax=Escherichia RepID=B7LNP4_ESCF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD70995.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
71_007_scaffold_256_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14208..14483
DNA (276bp) protein (92aa)
Phage protein n=12 Tax=Escherichia coli RepID=L3HGZ9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDK82884.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
hypothetical protein
71_007_scaffold_256_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14495..15073
DNA (579bp) protein (193aa)
Minor tail protein Z (GPZ) of prophage n=121 Tax=Escherichia coli RepID=B7N4Y3_ECOLU
Minor tail protein Z (GPZ) of prophage
Prophage minor tail protein Z {ECO:0000313|EMBL:EIH23857.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
71_007_scaffold_256_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15070..15471
DNA (402bp) protein (134aa)
Phage tail protein n=12 Tax=Escherichia coli RepID=L3HI18_ECOLX
Minor tail protein U
Phage minor tail protein U {ECO:0000313|EMBL:EFJ72640.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
71_007_scaffold_256_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15483..16226
DNA (744bp) protein (248aa)
Bacterial Ig-like domain family protein n=8 Tax=Escherichia coli RepID=N3BYE1_ECOLX
major tail protein V
Phage tail protein {ECO:0000313|EMBL:EOV82161.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
71_007_scaffold_256_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16284..16673
DNA (390bp) protein (130aa)
Phage minor tail protein G n=12 Tax=Escherichia coli RepID=L3HI76_ECOLX
putative minor tail component of putative prophage
Phage minor tail protein G {ECO:0000313|EMBL:EFJ72638.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
71_007_scaffold_256_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16694..17011
DNA (318bp) protein (106aa)
Phage tail assembly protein T n=2 Tax=Escherichia coli RepID=T6BIQ8_ECOLX
minor tail protein
Phage tail assembly protein T {ECO:0000313|EMBL:EFJ72637.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
71_007_scaffold_256_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16983..20048
DNA (3066bp) protein (1022aa)
Lambda family phage tail tape measure protein n=4 Tax=Escherichia coli RepID=L3HKP5_ECOLX
Lambda family phage tail tape measure protein {ECO:0000313|EMBL:EOV58143.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
putative tail length tape measure protein from putative prophage
71_007_scaffold_256_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20048..20377
DNA (330bp) protein (110aa)
Tail component of prophageCP-933K, Pu tat ive minor tail protein n=482 Tax=root RepID=E2QMA1_ECOLX
Minor tail protein M
Minor tail protein M {ECO:0000313|EMBL:CAR13021.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
71_007_scaffold_256_26
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20387..21049
DNA (663bp) protein (221aa)
Minor tail protein L n=13 Tax=Enterobacteriaceae RepID=B7NW40_ECO7I
minor tail protein L
Phage minor tail protein {ECO:0000313|EMBL:EFW48176.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
Displaying 28 items

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