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71_007_scaffold_296

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_296_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..885)
DNA (885bp) protein (295aa)
prmB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
50S ribosomal protein L3 glutamine methyltransferase n=25 Tax=Enterobacteriaceae RepID=B2TWB2_SHIB3
71_007_scaffold_296_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1051..1566
DNA (516bp) protein (172aa)
UPF0115 protein YfcN n=6 Tax=Escherichia coli RepID=T6HP77_ECOLX
UPF0115 protein YfcN {ECO:0000256|HAMAP-Rule:MF_01042}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Smr domain protein
71_007_scaffold_296_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1639..2493)
DNA (855bp) protein (285aa)
Uncharacterized protein n=46 Tax=Escherichia coli RepID=I0VT32_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EID67298.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
hypothetical protein
71_007_scaffold_296_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2495..3034)
DNA (540bp) protein (180aa)
Fimbrial protein n=68 Tax=Enterobacteriaceae RepID=D7Y3Y0_ECOLX
Fimbrial protein {ECO:0000313|EMBL:KHJ21296.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
fimbrial subunit protein
71_007_scaffold_296_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3031..3519)
DNA (489bp) protein (163aa)
Uncharacterized protein n=67 Tax=Enterobacteriaceae RepID=Q31YC2_SHIBS
putative minor fimbrial protein
Uncharacterized protein {ECO:0000313|EMBL:ESA66288.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_007_scaffold_296_6
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3516..4025)
DNA (510bp) protein (170aa)
Putaive minor fimbrial subunit n=142 Tax=Enterobacteriaceae RepID=B2TWU9_SHIB3
fimbrial protein
Putative fimbrial protein {ECO:0000313|EMBL:ABB66937.1}; TaxID=300268 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii serotype 4 (strain Sb227).;"
71_007_scaffold_296_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4041..4793)
DNA (753bp) protein (251aa)
Gram-negative pili assembly chaperone domain protein n=73 Tax=Escherichia coli RepID=D7Y3X7_ECOLX
putative chaperone
Gram-negative pili assembly chaperone domain protein {ECO:0000313|EMBL:EFJ97660.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
71_007_scaffold_296_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4813..7455)
DNA (2643bp) protein (881aa)
Uncharacterized protein n=16 Tax=Escherichia coli RepID=I2PR87_ECOLX
Putative outer membrane protein {ECO:0000313|EMBL:EGI46064.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
fimbrial usher family protein
71_007_scaffold_296_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7537..8100)
DNA (564bp) protein (188aa)
Fimbrial protein n=367 Tax=Enterobacteriaceae RepID=A8A2K8_ECOHS
yfcV; fimbrial-like adhesin protein
Fimbrial protein YfcV {ECO:0000313|EMBL:EOV57140.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
71_007_scaffold_296_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8945..9241)
DNA (297bp) protein (99aa)
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:KDZ17016.1}; EC=3.1.3.- {ECO:0000313|EMBL:KDZ17016.1};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
Phosphohistidine phosphatase SixA n=2 Tax=Escherichia coli RepID=N2XDR0_ECOLX
sixA; phosphohistidine phosphatase
71_007_scaffold_296_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9444..11588)
DNA (2145bp) protein (715aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3); K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Fatty acid oxidation complex subunit alpha n=1 Tax=Escherichia coli 113303 RepID=U9XXZ0_ECOLX
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01617, ECO:0000256|SAAS:SAAS00051619}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_007_scaffold_296_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11588..12898)
DNA (1311bp) protein (437aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022530}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022453};; ACSs {ECO:0000256|HAMAP-Rule:MF_01618}; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01618}; Acyl-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01618}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01618}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01618}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteo
yfcY; beta-ketoacyl-CoA thiolase, anaerobic subunit; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
3-ketoacyl-CoA thiolase n=13 Tax=Escherichia coli RepID=E7J5Q7_ECOLX
71_007_scaffold_296_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13078..13362)
DNA (285bp) protein (95aa)
Uncharacterized protein n=544 Tax=Enterobacteriaceae RepID=B6I6Q6_ECOSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENH02359.1}; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.5.;"
71_007_scaffold_296_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13734..15074
DNA (1341bp) protein (447aa)
Long-chain fatty acid transport protein n=138 Tax=Escherichia RepID=FADL_ECOLI
long-chain fatty acid outer membrane transporter; K06076 long-chain fatty acid transport protein
Outer membrane transport family protein {ECO:0000313|EMBL:KEO31959.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
71_007_scaffold_296_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15442..15579
DNA (138bp) protein (46aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=K3UBC7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KEL83204.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
hypothetical protein
71_007_scaffold_296_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15826..16500
DNA (675bp) protein (225aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=D7Y3W7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELD69585.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
hypothetical protein
71_007_scaffold_296_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16682..17437)
DNA (756bp) protein (252aa)
Lipoprotein n=952 Tax=Enterobacteriaceae RepID=Q8XCN3_ECOLX
VacJ family lipoprotein; K04754 lipoprotein
Lipoprotein {ECO:0000313|EMBL:ELE54356.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
71_007_scaffold_296_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17731..18663
DNA (933bp) protein (311aa)
Uncharacterized protein n=775 Tax=root RepID=B7LBK2_ECO55
putative transport protein
Inner membrane protein yfdC {ECO:0000313|EMBL:KEJ74698.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
71_007_scaffold_296_trna_1
unknown

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18739..18810
DNA (72bp)
transferRNA Arg
71_007_scaffold_296_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18958..20115
DNA (1158bp) protein (386aa)
Prophage integrase n=6 Tax=Escherichia coli RepID=I0VT17_ECOLX
Integrase {ECO:0000313|EMBL:KIH01478.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
CPS-53 (KpLE1) prophage; putative prophage CPS-53 integrase
71_007_scaffold_296_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20350..21264)
DNA (915bp) protein (305aa)
Transcriptional regulator, AraC family n=3 Tax=Escherichia coli RepID=I0VT16_ECOLX
Transcriptional regulator AraC protein {ECO:0000313|EMBL:ESA66273.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
putative ARAC-type regulatory protein
71_007_scaffold_296_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21528..22676
DNA (1149bp) protein (383aa)
NADH-dependent butanol dehydrogenase A; K00100 [EC:1.1.1.-]
Uncharacterized protein n=1 Tax=Escherichia coli KTE210 RepID=L3EBN9_ECOLX
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:EID67281.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
71_007_scaffold_296_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22715..23794
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE210 RepID=L3E969_ECOLX
Membrane protein {ECO:0000313|EMBL:KIH01475.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
membrane protein
71_007_scaffold_296_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24347..25678
DNA (1332bp) protein (444aa)
Diguanylate cyclase domain protein n=7 Tax=Escherichia coli RepID=I0VT13_ECOLX
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EID67279.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
diguanylate cyclase
71_007_scaffold_296_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25941..26258
DNA (318bp) protein (106aa)
Exonuclease n=6 Tax=Escherichia coli RepID=L3EAY2_ECOLX
exonuclease from phage origin
Exonuclease from phage origin {ECO:0000313|EMBL:CAR07288.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
71_007_scaffold_296_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26514..27044)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Escherichia coli O55:H7 (strain CB9615 / EPEC) RepID=D3QMW2_ECOCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA66266.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_007_scaffold_296_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27519..28352)
DNA (834bp) protein (278aa)
Transposase n=7 Tax=Escherichia coli RepID=I0VT09_ECOLX
Transposase, IS4 family {ECO:0000313|EMBL:ESA66264.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
transposase, IS4 family
71_007_scaffold_296_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28481..28825
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L3E975_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KIH01470.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
71_007_scaffold_296_28
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28961..29161
DNA (201bp) protein (67aa)
Response regulator inhibitor for tor operon n=273 Tax=root RepID=TORI_ECOLI
torI; response regulator inhibitor for tor operon
Response regulator inhibitor for tor operon {ECO:0000313|EMBL:EOV49239.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
71_007_scaffold_296_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29560..30219)
DNA (660bp) protein (220aa)
D-serine deaminase transcriptional activator n=12 Tax=Escherichia coli RepID=F4UAR1_ECOLX
dsdC; DNA-binding transcriptional dual regulator
D-serine deaminase transcriptional activator {ECO:0000313|EMBL:KEL29080.1}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
Displaying items 1-30 of 54 in total

View Taxonomy