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71_007_scaffold_353

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_353_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..393)
DNA (393bp) protein (131aa)
gadA; glutamate decarboxylase; K01580 glutamate decarboxylase [EC:4.1.1.15]
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
Glutamate decarboxylase (Fragment) n=1 Tax=Escherichia coli Envira 8/11 RepID=M9JZS0_ECOLX
71_007_scaffold_353_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(604..2001)
DNA (1398bp) protein (466aa)
Cytochrome C peroxidase {ECO:0000313|EMBL:EHX23043.1}; EC=1.11.1.5 {ECO:0000313|EMBL:EHX23043.1};; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Cytochrome C peroxidase (Cpp-like) n=332 Tax=Enterobacteriaceae RepID=B7L601_ECO55
yhjA; cytochrome C peroxidase
71_007_scaffold_353_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2406..4055
DNA (1650bp) protein (550aa)
Cytoplasmic trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; EC=3.2.1.28 {ECO:0000256|HAMAP-Rule:MF_01059};; Alpha,alpha-trehalase {ECO:0000256|HAMAP-Rule:MF_01059}; Alpha,alpha-trehalose glucohydrolase {ECO:0000256|HAMAP-Rule:MF_01059}; TaxID=1125641 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.2.;"
treF; Cytoplasmic trehalase; K01194 alpha,alpha-trehalase [EC:3.2.1.28]
Cytoplasmic trehalase n=344 Tax=Enterobacteriaceae RepID=TREF_ECO24
71_007_scaffold_353_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4106..4708)
DNA (603bp) protein (201aa)
Putative HTH-type transcriptional regulator YhjB n=528 Tax=Enterobacteriaceae RepID=YHJB_ECOLI
yhjB; putative DNA-binding response regulator in two-component regulatory system
LuxR family protein regulatory protein {ECO:0000313|EMBL:EGB66617.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
71_007_scaffold_353_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5156..6127
DNA (972bp) protein (324aa)
Predicted DNA-binding transcriptional regulator n=324 Tax=Enterobacteriaceae RepID=C8TJV8_ECO26
yhjC; putative DNA-binding transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EII36702.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
71_007_scaffold_353_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6176..7189
DNA (1014bp) protein (338aa)
Inner membrane protein yhjD n=1008 Tax=Enterobacteriaceae RepID=C3SNL7_ECOLX
yhjD; hypothetical protein; K07058 membrane protein
Inner membrane protein YhjD {ECO:0000313|EMBL:KEN44990.1}; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C2.;"
71_007_scaffold_353_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7600..8931
DNA (1332bp) protein (444aa)
Inner membrane metabolite transporter yhjE n=1 Tax=Escherichia coli KTE136 RepID=L4HFV7_ECOLX
inner membrane metabolite transport protein yhjE
Transporter {ECO:0000313|EMBL:ETE20965.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
71_007_scaffold_353_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9311..11017)
DNA (1707bp) protein (569aa)
Outer membrane biogenesis protein n=1 Tax=Escherichia coli UMEA 3671-1 RepID=T9PM12_ECOLX
AsmA family protein {ECO:0000313|EMBL:ESC98414.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
yhjG; putative outer membrane biogenesis protein
71_007_scaffold_353_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11087..11854)
DNA (768bp) protein (256aa)
Cyclic di-GMP phosphodiesterase YhjH n=420 Tax=Enterobacteriaceae RepID=YHJH_ECOLI
yhjH; EAL domain containing protein involved in flagellar function
Cyclic di-GMP phosphodiesterase YhjH {ECO:0000313|EMBL:ELC13743.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
71_007_scaffold_353_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12086..13015
DNA (930bp) protein (310aa)
kdgK; ketodeoxygluconokinase KdgK; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
2-dehydro-3-deoxygluconokinase n=1 Tax=Escherichia coli KTE210 RepID=L3E2E4_ECOLX
Ketodeoxygluconokinase {ECO:0000313|EMBL:KIH03866.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_353_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13111..14607)
DNA (1497bp) protein (499aa)
Peptidase, M16 (Pitrilysin) family n=242 Tax=Enterobacteriaceae RepID=A7ZT68_ECO24
yhjJ; zinc-dependent peptidase
Insulinase family protease {ECO:0000313|EMBL:EHW11735.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_007_scaffold_353_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14828..16114)
DNA (1287bp) protein (429aa)
C4-dicarboxylate transport protein n=1124 Tax=Enterobacteriaceae RepID=DCTA_ECO24
dctA; C4-dicarboxylic acid, orotate and citrate transporter; K11103 aerobic C4-dicarboxylate transport protein
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
71_007_scaffold_353_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16297..18246)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=234 Tax=Enterobacteriaceae RepID=J7R799_ECOLX
yhjK; putative diguanylate cyclase
YhjK protein {ECO:0000313|EMBL:CEP57255.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
71_007_scaffold_353_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18367..18825)
DNA (459bp) protein (153aa)
Cellulose synthase operon protein C n=1 Tax=Escherichia coli P0301867.11 RepID=N3F3T6_ECOLX
yhjL; cellulose synthase subunit BcsC
Cellulose synthase {ECO:0000313|EMBL:KJH06688.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_007_scaffold_353_15
unknown

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18943..20136
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae DMC0526 RepID=S2HR66_KLEPN
71_007_scaffold_353_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21666..22772)
DNA (1107bp) protein (369aa)
cellulase (EC:3.2.1.4)
Glucanase {ECO:0000256|RuleBase:RU361167}; EC=3.2.1.- {ECO:0000256|RuleBase:RU361167};; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Endo-1,4-D-glucanase n=274 Tax=Enterobacteriaceae RepID=B7L614_ECO55
71_007_scaffold_353_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22779..25082)
DNA (2304bp) protein (768aa)
Cellulose synthase BcsB n=21 Tax=Escherichia coli RepID=E0J5I8_ECOLW
Cellulose synthase {ECO:0000313|EMBL:AKF22708.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
yhjN; cellulose synthase regulator protein
71_007_scaffold_353_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25129..27747)
DNA (2619bp) protein (873aa)
bcsA; cellulose synthase catalytic subunit (EC:2.4.1.12)
Cellulose synthase (UDP-forming) n=249 Tax=Enterobacteriaceae RepID=A7ZT74_ECO24
BcsA {ECO:0000313|EMBL:EFE61394.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_007_scaffold_353_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27744..28496)
DNA (753bp) protein (251aa)
Putative cellulose biosynthesis protein BcsQ n=459 Tax=Enterobacteriaceae RepID=BCSQ_ECOLI
cell division protein
Cellulose synthase operon protein YhjQ {ECO:0000313|EMBL:KEL84412.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
71_007_scaffold_353_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28508..28696)
DNA (189bp) protein (63aa)
Uncharacterized protein YhjR n=596 Tax=Enterobacteriaceae RepID=YHJR_ECOLI
hypothetical protein
PF10945 family protein {ECO:0000313|EMBL:EII44241.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
71_007_scaffold_353_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28981..30540
DNA (1560bp) protein (520aa)
YhjS protein n=48 Tax=Escherichia coli RepID=D6I1Q5_ECOLX
Cellulose biosynthesis protein BcsE {ECO:0000313|EMBL:KDV40850.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
bcsE; cellulose biosynthesis protease
71_007_scaffold_353_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30537..30728
DNA (192bp) protein (64aa)
Protein BcsF homolog n=1329 Tax=Enterobacteriaceae RepID=BCSF_ECOL6
bcsF; hypothetical protein
Celllulose biosynthesis operon protein BcsF/YhjT {ECO:0000313|EMBL:EHP63847.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
71_007_scaffold_353_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30725..32404
DNA (1680bp) protein (560aa)
Cellulose synthase operon protein YhjU n=3 Tax=Escherichia coli RepID=L3E425_ECOLX
Membrane protein {ECO:0000313|EMBL:KJW47694.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
inner membrane protein
71_007_scaffold_353_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32490..32753)
DNA (264bp) protein (88aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=V8K8D0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE20949.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Displaying 24 items

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