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71_007_scaffold_361

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_361_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..492)
DNA (492bp) protein (164aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Escherichia coli O103:H25 str. CVM9340 RepID=I4NTM9_ECOLX
nhaA; sodium-proton antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
71_007_scaffold_361_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1266..2327)
DNA (1062bp) protein (354aa)
Chaperone protein DnaJ n=1 Tax=Escherichia coli HVH 40 (4-1219782) RepID=T5ZI09_ECOLX
dnaJ; molecular chaperone DnaJ; K03686 molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
71_007_scaffold_361_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2416..4188)
DNA (1773bp) protein (591aa)
Chaperone protein DnaK n=1 Tax=Escherichia coli P0299438.9 RepID=N2ZUI3_ECOLX
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
71_007_scaffold_361_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4623..5027
DNA (405bp) protein (135aa)
UPF0412 protein YaaI n=299 Tax=Enterobacteriaceae RepID=YAAI_ECO24
yaaI; hypothetical protein
UPF0412 protein YaaI {ECO:0000256|HAMAP-Rule:MF_01372}; Flags: Precursor;; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
71_007_scaffold_361_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5053..5766
DNA (714bp) protein (238aa)
Uncharacterized protein n=250 Tax=Enterobacteriaceae RepID=A7ZHA1_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE49254.1}; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
71_007_scaffold_361_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5915..6481
DNA (567bp) protein (189aa)
Inner membrane protein YaaH n=932 Tax=Enterobacteriaceae RepID=YAAH_ECO57
hypothetical protein
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:EFZ57077.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
71_007_scaffold_361_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6516..7103)
DNA (588bp) protein (196aa)
mogA; molybdenum cofactor biosynthesis protein MogA; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75]
Molybdopterin adenylyltransferase n=399 Tax=Enterobacteriaceae RepID=MOG_ECO57
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:KEL87542.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
71_007_scaffold_361_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7218..8171)
DNA (954bp) protein (318aa)
tal; transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
Transaldolase B n=547 Tax=Enterobacteriaceae RepID=TALB_ECOL6
71_007_scaffold_361_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8450..9880
DNA (1431bp) protein (477aa)
AGCS family alanine or glycine:cation symporter n=6 Tax=Escherichia coli RepID=D6I4Q6_ECOLX
Sodium:alanine symporter {ECO:0000313|EMBL:KDV39718.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
transporter
71_007_scaffold_361_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9950..10726
DNA (777bp) protein (259aa)
UPF0246 protein YaaA n=6 Tax=Escherichia coli RepID=D6I4Q5_ECOLX
UPF0246 protein YaaA {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
hypothetical protein
71_007_scaffold_361_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10879..11175)
DNA (297bp) protein (99aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=L5IVM0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX46779.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
71_007_scaffold_361_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11389..12648)
DNA (1260bp) protein (420aa)
Threonine synthase n=792 Tax=Enterobacteriaceae RepID=C3TRQ2_ECOLX
threonine synthase
Threonine synthase {ECO:0000313|EMBL:EQQ16540.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
71_007_scaffold_361_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12649..13581)
DNA (933bp) protein (311aa)
thrB; homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
Homoserine kinase n=612 Tax=Enterobacteriaceae RepID=KHSE_ECO24
71_007_scaffold_361_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13583..15055)
DNA (1473bp) protein (491aa)
thrA; fused aspartokinase I and homoserine dehydrogenase I; K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
Bifunctional aspartokinase/homoserine dehydrogenase 1 n=2 Tax=Escherichia coli RepID=N2X7V4_ECOLX
Aspartate kinase {ECO:0000313|EMBL:ADX52481.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
71_007_scaffold_361_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15202..16029)
DNA (828bp) protein (276aa)
thrA; fused aspartokinase I and homoserine dehydrogenase I; K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
ThrA {ECO:0000313|EMBL:EHU45308.1}; EC=2.7.2.4 {ECO:0000313|EMBL:EHU45308.1};; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Bifunctional aspartokinase/homoserine dehydrogenase 1 n=1 Tax=Escherichia coli BCE002_MS12 RepID=M8QL56_ECOLX
71_007_scaffold_361_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16389..17075)
DNA (687bp) protein (229aa)
lasT; rRNA methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
Uncharacterized protein n=97 Tax=Enterobacteriaceae RepID=B6I6Q1_ECOSE
71_007_scaffold_361_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17711..18427
DNA (717bp) protein (239aa)
Aerobic respiration control protein ArcA n=1411 Tax=Enterobacteriaceae RepID=ARCA_ECO57
two-component response regulator; K07773 two-component system, OmpR family, aerobic respiration control protein ArcA
DNA-binding response regulator in two-component regulatory system with ArcB or CpxA {ECO:0000313|EMBL:CAR16141.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
71_007_scaffold_361_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18487..19839)
DNA (1353bp) protein (451aa)
Inner membrane protein n=59 Tax=Escherichia coli RepID=D6I4P8_ECOLX
Inner membrane protein CreD {ECO:0000313|EMBL:EGU99851.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
hypothetical protein
71_007_scaffold_361_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19897..21321)
DNA (1425bp) protein (475aa)
integral membrane sensor signal transduction histidine kinase; K07641 two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
Sensor protein CreC n=115 Tax=Enterobacteriaceae RepID=A7ZVU1_ECO24
71_007_scaffold_361_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21321..22010)
DNA (690bp) protein (230aa)
Transcriptional regulatory protein CreB n=202 Tax=Escherichia coli RepID=A8A8C7_ECOHS
DNA-binding response regulator CreB
Response regulator receiver domain protein {ECO:0000313|EMBL:EFI88540.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
71_007_scaffold_361_21
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22023..22496)
DNA (474bp) protein (158aa)
Protein CreA n=1407 Tax=Enterobacteriaceae RepID=CREA_ECO57
creA; hypothetical protein; K05805 CreA protein
Protein CreA {ECO:0000256|PIRNR:PIRNR003174}; Catabolite regulation protein A {ECO:0000256|PIRNR:PIRNR003174}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
71_007_scaffold_361_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22707..23576
DNA (870bp) protein (290aa)
Right origin-binding protein n=1075 Tax=Enterobacteriaceae RepID=ROB_ECO57
right origin-binding protein; K05804 right origin-binding protein
Right origin-binding protein {ECO:0000313|EMBL:EFJ79840.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
71_007_scaffold_361_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23573..24220)
DNA (648bp) protein (216aa)
ytjC; phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Probable phosphoglycerate mutase GpmB {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013984}; EC=5.4.2.- {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013981};; PGAM {ECO:0000256|HAMAP-Rule:MF_01040}; Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01040}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Probable phosphoglycerate mutase GpmB n=978 Tax=Enterobacteriaceae RepID=GPMB_ECO24
71_007_scaffold_361_24
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24272..24793
DNA (522bp) protein (174aa)
Non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; Non-standard purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; Nucleoside-triphosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri K-315.;"
Non-canonical purine NTP phosphatase n=6 Tax=Shigella sonnei RepID=Q3YU00_SHISS
yjjX; NTPase
71_007_scaffold_361_25
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24878..25174)
DNA (297bp) protein (99aa)
Trp operon repressor n=909 Tax=Proteobacteria RepID=TRPR_ECO24
Trp operon repressor; K03720 TrpR family transcriptional regulator, trp operon repressor
Trp operon repressor {ECO:0000256|HAMAP-Rule:MF_00475, ECO:0000256|SAAS:SAAS00234182}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
71_007_scaffold_361_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25294..27231)
DNA (1938bp) protein (646aa)
Soluble lytic murein transglycosylase n=6 Tax=Escherichia coli RepID=G1YI91_ECOLX
Lytic murein transglycosylase {ECO:0000313|EMBL:EFE60551.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
slt; hypothetical protein
71_007_scaffold_361_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27442..28920
DNA (1479bp) protein (493aa)
Heme ABC exporter, ATP-binding protein CcmA n=1 Tax=Escherichia coli 179100 RepID=N3I4M2_ECOLX
yjjK; sugar ABC transporter ATP-binding protein
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:EOU95862.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
71_007_scaffold_361_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29345..29503)
DNA (159bp) protein (53aa)
bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000313|EMBL:EFJ86287.1}; EC=2.7.7.1 {ECO:0000313|EMBL:EFJ86287.1};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
Trifunctional NAD biosynthesis/regulator protein NadR n=2 Tax=Escherichia coli RepID=M8YYN2_ECOLX
Displaying 28 items

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