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71_007_scaffold_408

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Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_408_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(145..579)
DNA (435bp) protein (145aa)
Translation initiation factor IF-3 n=1320 Tax=Enterobacteriaceae RepID=E2QMS8_ECOLX
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1064551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Thompson str. RM6836.;"
71_007_scaffold_408_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(691..2619)
DNA (1929bp) protein (643aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=168927 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H-.;"
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase n=174 Tax=Escherichia coli RepID=SYT_ECO8A
71_007_scaffold_408_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3550..4776
DNA (1227bp) protein (409aa)
Non-LEE-encoded type III secreted effector n=10 Tax=Escherichia coli RepID=I1BD41_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESP08469.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
Ankyrin repeat protein B
71_007_scaffold_408_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5297..6055)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1146 Tax=Enterobacteriaceae RepID=C3T7N7_ECOLX
ydiY; hypothetical protein; K07283 putative salt-induced outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EHU11295.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
71_007_scaffold_408_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6342..7271
DNA (930bp) protein (310aa)
pfkB; 6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
Phosphofructokinase n=573 Tax=Enterobacteriaceae RepID=C3T7N2_ECOLX
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
71_007_scaffold_408_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7372..7662
DNA (291bp) protein (97aa)
Uncharacterized protein YdiZ n=785 Tax=Enterobacteriaceae RepID=YDIZ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDZ18106.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
71_007_scaffold_408_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7768..8628
DNA (861bp) protein (287aa)
Uncharacterized protein YniA n=505 Tax=Enterobacteriaceae RepID=YNIA_ECO57
fructosamine kinase
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:ENA08153.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
71_007_scaffold_408_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8669..9205)
DNA (537bp) protein (179aa)
Uncharacterized protein n=681 Tax=Enterobacteriaceae RepID=J7R1P9_ECOLX
hypothetical protein
YniB-like family protein {ECO:0000313|EMBL:ENB13409.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
71_007_scaffold_408_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9352..10020
DNA (669bp) protein (223aa)
Phosphatase YniC {ECO:0000313|EMBL:KEL70937.1}; EC=3.1.3.- {ECO:0000313|EMBL:KEL70937.1};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
2-deoxyglucose-6-phosphate phosphatase n=761 Tax=Enterobacteriaceae RepID=YNIC_ECO57
yniC; 2-deoxyglucose-6-P phosphatase
71_007_scaffold_408_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10183..10773
DNA (591bp) protein (197aa)
Inner membrane protein ydjM n=908 Tax=Enterobacteriaceae RepID=C3T7K7_ECOLX
ydjM; hypothetical protein; K07038 inner membrane protein
Inner membrane protein ydjM {ECO:0000313|EMBL:EMX19570.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
71_007_scaffold_408_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10906..12297
DNA (1392bp) protein (464aa)
Predicted transporter n=124 Tax=Escherichia coli RepID=C8TSP5_ECO26
ydjN; putative transporter; K06956
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EFK68538.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
71_007_scaffold_408_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12301..12678)
DNA (378bp) protein (126aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=D7YK09_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EYV53334.1}; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
hypothetical protein
71_007_scaffold_408_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12748..13116)
DNA (369bp) protein (123aa)
Uncharacterized protein n=224 Tax=Enterobacteriaceae RepID=B6IBF0_ECOSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK02374.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
71_007_scaffold_408_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13393..13656)
DNA (264bp) protein (88aa)
Cell division activator CedA n=17 Tax=Escherichia coli RepID=F4V2Q0_ECOLX
cedA; cell division modulator CedA; K15722 cell division activator
Cell division activator CedA {ECO:0000256|HAMAP-Rule:MF_01580}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
71_007_scaffold_408_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13839..16100
DNA (2262bp) protein (754aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=868181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC10B.;"
katE; hydroxyperoxidase KatE; K03781 catalase [EC:1.11.1.6]
Catalase n=130 Tax=Enterobacteriaceae RepID=B7M1E4_ECO8A
71_007_scaffold_408_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16147..16608)
DNA (462bp) protein (154aa)
Chitooligosaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Short=COD {ECO:0000256|HAMAP-Rule:MF_01246};; EC=3.5.1.105 {ECO:0000256|HAMAP-Rule:MF_01246};; Chitin disaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; TaxID=1446741 species="Bacteria; Proteobac
UPF0249 protein ChbG n=1 Tax=Escherichia coli MS 182-1 RepID=D7YK13_ECOLX
chbG; hypothetical protein; K03478 hypothetical protein
71_007_scaffold_408_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16568..16843)
DNA (276bp) protein (92aa)
Chitooligosaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Short=COD {ECO:0000256|HAMAP-Rule:MF_01246};; EC=3.5.1.105 {ECO:0000256|HAMAP-Rule:MF_01246};; Chitin disaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; TaxID=749533 species="Bacteria; Proteobact
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0002BABD20
chbG; hypothetical protein; K03478 hypothetical protein
71_007_scaffold_408_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16856..18208)
DNA (1353bp) protein (451aa)
6-phospho-beta-glucosidase n=277 Tax=Enterobacteriaceae RepID=A7ZMK1_ECO24
cryptic phospho-beta-glucosidase, NAD(P)-binding protein
Diacetylchitobiose-6-phosphate hydrolase {ECO:0000313|EMBL:ETD61192.1}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
71_007_scaffold_408_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18313..19152)
DNA (840bp) protein (280aa)
ChbR n=766 Tax=Enterobacteriaceae RepID=A4UR74_ECOLX
chbR; DNA-binding transcriptional dual regulator ChbR; K03490 AraC family transcriptional regulator, cel operon repressor
HTH-type transcriptional regulator ChbR {ECO:0000313|EMBL:ELG88842.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
71_007_scaffold_408_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19163..19513)
DNA (351bp) protein (117aa)
PTS system, lactose-specific IIa component; K02759 PTS system, cellobiose-specific IIA component [EC:2.7.1.69]
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component n=1085 Tax=Enterobacteriaceae RepID=PTQA_ECO57
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIAcomponent (PTS system N,N'-diacetylchitobiose-specificEIIA component) (EIIA-Chb) (EIII-Chb) {ECO:0000313|EMBL:EGI50655.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
71_007_scaffold_408_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19564..20922)
DNA (1359bp) protein (453aa)
N,N'-diacetylchitobiose permease IIC component n=617 Tax=Enterobacteriaceae RepID=PTQC_ECOLI
chbC; N,N'-diacetylchitobiose-specific enzyme IIC component of PTS; K02761 PTS system, cellobiose-specific IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
71_007_scaffold_408_22
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21007..21327)
DNA (321bp) protein (107aa)
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component n=1368 Tax=Enterobacteriaceae RepID=PTQB_ECO57
chbB; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:EOW66276.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
71_007_scaffold_408_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21626..21964)
DNA (339bp) protein (113aa)
Osmotically-inducible lipoprotein E n=976 Tax=Enterobacteriaceae RepID=OSME_ECO57
osmE; DNA-binding transcriptional activator
SmpA / OmlA family protein {ECO:0000313|EMBL:EMV60525.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
71_007_scaffold_408_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22166..22993
DNA (828bp) protein (276aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
nadE; NAD synthetase (EC:6.3.5.1); K01916 NAD+ synthase [EC:6.3.1.5]
NH(3)-dependent NAD(+) synthetase n=26 Tax=Escherichia coli RepID=B3IJX1_ECOLX
71_007_scaffold_408_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23223..24110
DNA (888bp) protein (296aa)
ydjQ; nucleotide excision repair endonuclease; K05984 excinuclease Cho [EC:3.1.25.-]
Endonuclease of nucleotide excision repair n=48 Tax=Escherichia coli RepID=B7M1F3_ECO8A
Endonuclease cho {ECO:0000313|EMBL:ESC98867.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
71_007_scaffold_408_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24070..24645)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Escherichia coli MS 21-1 RepID=D8AB27_ECOLX
ydjR; hypothetical protein; K09975 hypothetical protein
Protein Ves {ECO:0000256|HAMAP-Rule:MF_01591}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
71_007_scaffold_408_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24848..25333)
DNA (486bp) protein (162aa)
Periplasmic protein related to spheroblast formation n=660 Tax=Enterobacteriaceae RepID=C3T7D2_ECOLX
spy; periplasmic protein
Spheroplast protein Y {ECO:0000313|EMBL:EMX40062.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
71_007_scaffold_408_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25663..26631)
DNA (969bp) protein (323aa)
astE; succinylglutamate desuccinylase (EC:3.5.1.96); K05526 succinylglutamate desuccinylase [EC:3.5.1.96]
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Succinylglutamate desuccinylase n=126 Tax=Enterobacteriaceae RepID=ASTE_ECO24
71_007_scaffold_408_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26624..27289)
DNA (666bp) protein (222aa)
succinylarginine dihydrolase (EC:3.5.3.23)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
N-succinylarginine dihydrolase n=1 Tax=Escherichia coli STEC_O31 RepID=J2EIX9_ECOLX
71_007_scaffold_408_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27295..27738)
DNA (444bp) protein (148aa)
astB; succinylarginine dihydrolase; K01484 succinylarginine dihydrolase [EC:3.5.3.23]
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
N-succinylarginine dihydrolase n=1 Tax=Escherichia coli P0305260.10 RepID=N4DM17_ECOLX
Displaying items 1-30 of 59 in total

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