ggKbase home page

71_007_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_158_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(329..2371)
DNA (2043bp) protein (681aa)
Efflux ABC transporter, permease protein n=3 Tax=Enterococcus faecium RepID=J9A002_ENTFC
Efflux ABC transporter permease {ECO:0000313|EMBL:ELB54293.1}; TaxID=1138924 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0056.;"
hypothetical protein
71_007_scaffold_158_2
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2361..3164)
DNA (804bp) protein (268aa)
ABC transporter, ATP-binding protein n=6 Tax=Enterococcus faecium RepID=C2H822_ENTFC
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJV55679.1}; TaxID=1134802 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TX1337RF.;"
ABC superfamily ATP binding cassette transporter, ABC protein
71_007_scaffold_158_3
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3448..5637
DNA (2190bp) protein (730aa)
Ribonucleoside-triphosphate reductase n=13 Tax=Enterococcus faecium RepID=C9AQ79_ENTFC
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ELB52615.1}; TaxID=1138921 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0038.;"
Ribonucleotide reductase of class III (anaerobic), large subunit
71_007_scaffold_158_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6073..6675
DNA (603bp) protein (201aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1400823 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium UC7256.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=19 Tax=Enterococcus faecium RepID=C2H820_ENTFC
Ribonucleotide reductase of class III (anaerobic), activating protein
71_007_scaffold_158_5
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6729..7847)
DNA (1119bp) protein (373aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1138916 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0033.;"
DNA polymerase IV n=8 Tax=Enterococcus faecium RepID=C9AQ81_ENTFC
DNA polymerase IV
71_007_scaffold_158_6
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7959..8831)
DNA (873bp) protein (291aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1138924 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0056.;"
Ribosomal RNA small subunit methyltransferase I n=5 Tax=Enterococcus faecium RepID=C9BGJ6_ENTFC
tetrapyrrole methylase family protein
71_007_scaffold_158_7
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8900..9247)
DNA (348bp) protein (116aa)
Initiation-control protein YabA n=235 Tax=Firmicutes RepID=H8LDG7_ENTFU
yabA; regulator of replication initiation timing
Initiation-control protein YabA {ECO:0000256|HAMAP-Rule:MF_01159, ECO:0000256|SAAS:SAAS00063209}; TaxID=1134823 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium ERV168.;"
71_007_scaffold_158_8
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9240..10064)
DNA (825bp) protein (275aa)
PSP1 protein n=3 Tax=Enterococcus faecium RepID=J8WKJ6_ENTFC
PSP1 protein {ECO:0000313|EMBL:EJV55803.1}; TaxID=1134802 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TX1337RF.;"
Signal peptidase-like protein
71_007_scaffold_158_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10100..11038)
DNA (939bp) protein (313aa)
holB; DNA-directed DNA polymerase III delta' subunit (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=16 Tax=Enterococcus faecium RepID=C2H815_ENTFC
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:ELA99665.1}; TaxID=1138901 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0003.;"
71_007_scaffold_158_10
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11052..11381)
DNA (330bp) protein (110aa)
Uncharacterized protein n=234 Tax=Firmicutes RepID=H8LDG4_ENTFU
protein from nitrogen regulatory protein P-II (GLNB) family
Uncharacterized protein {ECO:0000313|EMBL:EJX79901.1}; TaxID=1134828 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium P1123.;"
71_007_scaffold_158_11
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11396..12040)
DNA (645bp) protein (215aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1138924 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0056.;"
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=1 Tax=Enterococcus faecium EnGen0056 RepID=L2QK42_ENTFC
71_007_scaffold_158_12
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12104..12700)
DNA (597bp) protein (199aa)
Recombination protein RecR n=18 Tax=Enterococcus faecium RepID=C2H812_ENTFC
recR; recombination protein RecR; K06187 recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1138902 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0028.;"
71_007_scaffold_158_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12725..13039)
DNA (315bp) protein (105aa)
Nucleoid-associated protein EFAU004_00711 n=176 Tax=Firmicutes RepID=H8LDG1_ENTFU
hypothetical protein co-occurring with RecR
Nucleoid-associated protein OKO_02139 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1138924 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0056.;"
71_007_scaffold_158_14
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13060..14805)
DNA (1746bp) protein (582aa)
dnaZX; DNA-directed DNA polymerase III gamma and tau subunit (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=9 Tax=Enterococcus faecium RepID=C2H810_ENTFC
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:ELA99660.1}; TaxID=1138901 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0003.;"
71_007_scaffold_158_15
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15020..16267
DNA (1248bp) protein (416aa)
Uncharacterized protein n=6 Tax=Enterococcus faecium RepID=J6Z1I1_ENTFC
Virion core protein {ECO:0000313|EMBL:AII39661.1}; TaxID=1344042 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium T110.;"
Putative virion core protein
71_007_scaffold_158_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16292..17476
DNA (1185bp) protein (395aa)
Conserved protein YdjG n=6 Tax=Enterococcus faecium RepID=D4QLZ2_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELB58396.1}; TaxID=1138926 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0047.;"
hypothetical protein
71_007_scaffold_158_17
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17473..18270
DNA (798bp) protein (266aa)
Uncharacterized protein n=10 Tax=Enterococcus faecium RepID=C2H807_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELB54277.1}; TaxID=1138924 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0056.;"
hypothetical protein
71_007_scaffold_158_18
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18654..19349)
DNA (696bp) protein (232aa)
Transcriptional regulator, Crp/Fnr family n=205 Tax=Enterococcus RepID=H8LDF6_ENTFU
transcriptional regulator, Crp, Fnr family
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EJY38087.1}; TaxID=1134810 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 511.;"
71_007_scaffold_158_19
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19503..19781
DNA (279bp) protein (93aa)
Uncharacterized protein n=228 Tax=Firmicutes RepID=H8LDF5_ENTFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJX40902.1}; TaxID=1134840 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium S447.;"
71_007_scaffold_158_20
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19800..21008
DNA (1209bp) protein (403aa)
Transporter, major facilitator family protein n=12 Tax=Enterococcus RepID=C2H803_ENTFC
Major facilitator family transporter {ECO:0000313|EMBL:EFF38795.1}; TaxID=529885 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium E980.;"
transporter
71_007_scaffold_158_21
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21155..21520)
DNA (366bp) protein (122aa)
Uncharacterized protein n=201 Tax=Firmicutes RepID=L8A8J8_ENTFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR70130.1}; TaxID=749524 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TX0133B.;"
71_007_scaffold_158_22
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21677..22450)
DNA (774bp) protein (258aa)
Transcriptional regulator, DeoR family n=1 Tax=Enterococcus faecium 505 RepID=J7CXH7_ENTFC
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EJY47187.1}; TaxID=1134806 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 505.;"
Transcriptional regulator of rhamnose utilization, DeoR family
71_007_scaffold_158_23
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22624..23484)
DNA (861bp) protein (287aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Ketose-bisphosphate aldolase n=10 Tax=Enterococcus faecium RepID=L2ISX4_ENTFC
Putative tagatose-bisphosphate aldolase {ECO:0000313|EMBL:EJY47188.1}; TaxID=1134806 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 505.;"
71_007_scaffold_158_24
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23484..24902)
DNA (1419bp) protein (473aa)
PTS system, Fru family, IIC component n=2 Tax=Enterococcus faecium RepID=L2IS36_ENTFC
PTS system, Fru family, IIC component {ECO:0000313|EMBL:ELB38445.1}; TaxID=1138917 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0026.;"
PTS system, fructose-specific IIBC component (EIIBC-Fru)
71_007_scaffold_158_25
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24959..25408)
DNA (450bp) protein (150aa)
PTS system, fructose subfamily, IIA component n=1 Tax=Enterococcus faecium EnGen0047 RepID=L2QZM8_ENTFC
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:ELB58386.1}; TaxID=1138926 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0047.;"
PTS system, fructose-specific IIA component
71_007_scaffold_158_26
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25842..25964)
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Enterococcus faecium RepID=L2LSA7_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELB28847.1}; TaxID=1138914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0042.;"
71_007_scaffold_158_27
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25989..26135)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0042 RepID=L2NJT7_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELB28846.1}; TaxID=1138914 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0042.;"
71_007_scaffold_158_28
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26153..26743)
DNA (591bp) protein (197aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=1 Tax=Enterococcus faecium EnGen0042 RepID=L2NH22_ENTFC
Radical SAM additional 4Fe4S-binding domain-containing protein {ECO:0000313|EMBL:ELB07667.1}; TaxID=1138902 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0028.;"
arylsulfatase regulatory protein; K06871 uncharacterized protein
71_007_scaffold_158_29
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26912..27736)
DNA (825bp) protein (275aa)
Integrase catalytic subunit n=5 Tax=Enterococcus faecium RepID=C9ATL2_ENTFC
Integrase catalytic subunit {ECO:0000313|EMBL:EEV63352.1}; TaxID=565663 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium Com15.;"
putative transposase orfB for insertion sequence element
71_007_scaffold_158_30
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27793..28041)
DNA (249bp) protein (83aa)
Transposase n=7 Tax=Enterococcus RepID=C2H788_ENTFC
Transposase {ECO:0000313|EMBL:EEI61714.1}; TaxID=525279 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TX1330.;"
transposase IS3/IS911 family protein
Displaying items 1-30 of 36 in total

View Taxonomy