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71_007_scaffold_1

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Displaying items 1-30 of 296 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_1_1
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

678..812
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D722_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGY76299.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
71_007_scaffold_1_2
unknown

Not on your lists

1212..1601
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287F663
71_007_scaffold_1_3
unknown

Not on your lists

1780..2049
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002894F6B
71_007_scaffold_1_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2128..3060
DNA (933bp) protein (311aa)
transposase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A0DA4
putative transposase
Putative transposase {ECO:0000313|EMBL:BAG09204.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus).;"
71_007_scaffold_1_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3036..3824
DNA (789bp) protein (263aa)
Putative transposase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S4L2_FINM2
putative transposase
Putative transposase {ECO:0000313|EMBL:BAG09203.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus).;"
71_007_scaffold_1_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3906..4253)
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
growth inhibitor; K07171 mRNA interferase [EC:3.1.-.-]
growth inhibitor PemK n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A1FA0
71_007_scaffold_1_7
unknown

Not on your lists

comp(4376..4648)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288468A
71_007_scaffold_1_8
unknown

Not on your lists

comp(4697..4954)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289CD67
71_007_scaffold_1_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5197..6384)
DNA (1188bp) protein (396aa)
4'-phosphopantetheinyl transferase {ECO:0000256|SAAS:SAAS00237164}; EC=2.7.8.- {ECO:0000256|SAAS:SAAS00276260};; EC=2.7.8.7 {ECO:0000256|SAAS:SAAS00237180};; Holo-[acyl-carrier-protein] synthase {ECO:0000256|SAAS:SAAS00237208}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
carbohydrate kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A2BE1
carbohydrate kinase-like protein
71_007_scaffold_1_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6586..7818
DNA (1233bp) protein (411aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
tyrosyl-tRNA synthetase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288EE04
71_007_scaffold_1_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7820..9211
DNA (1392bp) protein (464aa)
Xaa-His dipeptidase {ECO:0000313|EMBL:EFR32800.1}; EC=3.4.13.3 {ECO:0000313|EMBL:EFR32800.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
aminoacyl-histidine dipeptidase; K01270 dipeptidase D [EC:3.4.13.-]
Xaa-His dipeptidase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288DF5E
71_007_scaffold_1_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9406..9798)
DNA (393bp) protein (131aa)
anti-sigma F factor (EC:2.7.11.1)
anti-sigma regulatory factor n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002894985
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32727.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_1_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9969..10130
DNA (162bp) protein (54aa)
rubredoxin n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289B617
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rubredoxin
71_007_scaffold_1_14
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10208..11317)
DNA (1110bp) protein (370aa)
peptidase M20 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028872B2
Putative peptidase T-like protein {ECO:0000313|EMBL:ERT57340.1}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
hypothetical protein
71_007_scaffold_1_15
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11326..11994)
DNA (669bp) protein (223aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289642C
Putative membrane protein {ECO:0000313|EMBL:EGS35246.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
hypothetical protein
71_007_scaffold_1_16
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12005..12706)
DNA (702bp) protein (234aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A192A
Putative membrane protein {ECO:0000313|EMBL:EGS35446.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
hypothetical protein
71_007_scaffold_1_17
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12877..13737)
DNA (861bp) protein (287aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family {ECO:0000313|EMBL:EFK38746.1}; EC=2.7.4.- {ECO:0000313|EMBL:EFK38746.1};; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str. F0141.;"
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A03D2
hypothetical protein
71_007_scaffold_1_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13986..14657)
DNA (672bp) protein (224aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
uracil-DNA glycosylase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D3BE
71_007_scaffold_1_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14641..16029)
DNA (1389bp) protein (463aa)
TrkA n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A3C0A
TrkA C-terminal domain protein {ECO:0000313|EMBL:EFR32797.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
trkA; potassium transporter peripheral membrane protein; K03499 trk system potassium uptake protein TrkA
71_007_scaffold_1_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16029..17483)
DNA (1455bp) protein (485aa)
Trk system potassium transporter TrkH n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289CA8C
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EFR32735.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
cation transporter; K03498 trk system potassium uptake protein TrkH
71_007_scaffold_1_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17473..18873)
DNA (1401bp) protein (467aa)
potassium transporter TrkA n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A1853
TrkA N-terminal domain protein {ECO:0000313|EMBL:EFR32801.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
trkA; potassium transporter peripheral membrane component; K03499 trk system potassium uptake protein TrkA
71_007_scaffold_1_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18883..20031)
DNA (1149bp) protein (383aa)
cobalt-zinc-cadmium resistance protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888CEF
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFR32773.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
cation efflux protein
71_007_scaffold_1_23
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20261..20827)
DNA (567bp) protein (189aa)
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D9A0
DJ-1 family protein {ECO:0000313|EMBL:EFR32765.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
thij/PfpI family protein
71_007_scaffold_1_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20847..21611)
DNA (765bp) protein (255aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
pyrroline-5-carboxylate reductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289F6CD
71_007_scaffold_1_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21690..22250
DNA (561bp) protein (187aa)
chromate transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A40D6
Chromate transport protein {ECO:0000313|EMBL:EFR32710.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
chromate transport protein; K07240 chromate transporter
71_007_scaffold_1_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22243..22800
DNA (558bp) protein (186aa)
chromate transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C5D7
Chromate transport protein {ECO:0000313|EMBL:EFR32719.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
chromate transport protein; K07240 chromate transporter
71_007_scaffold_1_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22839..23777)
DNA (939bp) protein (313aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFR33600.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFR33600.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288BAB4
d-isomer specific 2-hydroxyacid dehydrogenase, nad-binding
71_007_scaffold_1_28
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23778..24680)
DNA (903bp) protein (301aa)
alpha/beta hydrolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289C010
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:EGY80591.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
hydrolase or acyltransferase
71_007_scaffold_1_29
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24816..26381
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028878C3
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR33694.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_1_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26487..27056
DNA (570bp) protein (190aa)
RNA polymerase subunit sigma-70 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028989F9
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
Displaying items 1-30 of 296 in total

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