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71_007_scaffold_9

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Displaying items 31-60 of 170 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_9_31
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25901..26620)
DNA (720bp) protein (240aa)
chemotaxis protein CheY n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289600B
Response regulator receiver domain protein {ECO:0000313|EMBL:EFR33205.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
transcriptional activator protein
71_007_scaffold_9_32
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26608..27093)
DNA (486bp) protein (162aa)
Dihydrofolate reductase {ECO:0000313|EMBL:EFR33178.1}; EC=1.5.1.3 {ECO:0000313|EMBL:EFR33178.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
dihydrofolate reductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888DAD
dihydrofolate reductase
71_007_scaffold_9_33
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27469..28197
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889777
Uncharacterized protein {ECO:0000313|EMBL:EDU37346.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
71_007_scaffold_9_trna_1
unknown

Not on your lists

28706..28776
DNA (71bp)
transferRNA Cys
71_007_scaffold_9_34
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28794..29813)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002884DE8
Conserved domain protein {ECO:0000313|EMBL:EFR32256.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_35
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29934..31106)
DNA (1173bp) protein (391aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
S-adenosylmethionine synthetase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889B16
methionine adenosyltransferase
71_007_scaffold_9_36
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31432..32385)
DNA (954bp) protein (318aa)
transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002884A53
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EFR32261.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Auxin Efflux Carrier family protein; K07088
71_007_scaffold_9_37
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32472..33380
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002894A1D
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32249.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_38
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33392..33622
DNA (231bp) protein (77aa)
disulfide oxidoreductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002898BEC
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:EFR32246.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_39
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33683..35692
DNA (2010bp) protein (670aa)
S-layer protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288E7C4
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EFR32290.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_40
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

35749..36753
DNA (1005bp) protein (335aa)
polysaccharide deacetylase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287CE9D
Polysaccharide deacetylase family protein
Chitooligosaccharide deactylase {ECO:0000313|EMBL:AHZ59537.1}; Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EAX95013.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
71_007_scaffold_9_41
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37037..38302)
DNA (1266bp) protein (422aa)
NAD-specific glutamate dehydrogenase; K00260 glutamate dehydrogenase [EC:1.4.1.2]
glutamate dehydrogenase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028846B8
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_42
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38702..39586
DNA (885bp) protein (295aa)
transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287CCB7
Putative membrane protein {ECO:0000313|EMBL:EFR33214.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_43
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39632..40351)
DNA (720bp) protein (240aa)
CAAX amino terminal protease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002892CD1
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFR33216.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
CAAX amino terminal protease
71_007_scaffold_9_44
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40323..40865)
DNA (543bp) protein (181aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289242A
71_007_scaffold_9_45
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40867..43458)
DNA (2592bp) protein (864aa)
nuclease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028980D1
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33298.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_46
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43439..44428)
DNA (990bp) protein (330aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24)
pseudouridine synthase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A1B17
71_007_scaffold_9_47
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44503..45228
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C928
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33264.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_48
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45252..46427)
DNA (1176bp) protein (392aa)
GTP-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288873A
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:EFR32228.1}; Flags: Fragment;; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
iron-only hydrogenase maturation protein HydF
71_007_scaffold_9_49
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46418..47866)
DNA (1449bp) protein (483aa)
thiamine biosynthesis protein ThiH n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287A60F
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EFR33834.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
iron-only hydrogenase maturation protein HydG
71_007_scaffold_9_50
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47809..48903)
DNA (1095bp) protein (365aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
biotin synthase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A27A2
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EFR33794.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_51
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49119..50474
DNA (1356bp) protein (452aa)
multidrug transporter MatE n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002885E28
MATE efflux family protein {ECO:0000313|EMBL:EFR33842.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative efflux protein, MATE family
71_007_scaffold_9_52
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50553..51506)
DNA (954bp) protein (318aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287E3C4
71_007_scaffold_9_53
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51575..52462
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288E91A
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33856.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_54
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52532..53053)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002892979
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33844.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_55
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53054..54070)
DNA (1017bp) protein (339aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Pep
isopentenyl pyrophosphate isomerase; K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]
isopentenyl pyrophosphate isomerase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287B86D
71_007_scaffold_9_56
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54118..55086)
DNA (969bp) protein (323aa)
transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028845F3
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_57
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55071..55937)
DNA (867bp) protein (289aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288898A
Nucleotide-binding protein HMPREF9286_0488 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nucleotide-binding protein yhbJ; K06958 UPF0042 nucleotide-binding protein
71_007_scaffold_9_58
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55956..56858)
DNA (903bp) protein (301aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158]
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289E26E
71_007_scaffold_9_59
unknown

Not on your lists

comp(57319..58065)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028812D3
Displaying items 31-60 of 170 in total

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