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71_007_scaffold_9

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Displaying items 61-90 of 170 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_9_60
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58077..58553)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288F31D
Putative lipoprotein {ECO:0000313|EMBL:EFR33267.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_61
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59033..59515)
DNA (483bp) protein (161aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ferritin Dps family protein; K02217 ferritin [EC:1.16.3.1]
ferritin Dps family protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289AEAF
71_007_scaffold_9_62
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59611..61713)
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002891CA0
Conserved domain protein {ECO:0000313|EMBL:EFR33785.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_63
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61742..62635)
DNA (894bp) protein (298aa)
stage 0 sporulation protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288AF5E
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EFR33797.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
signal peptidase-like protein
71_007_scaffold_9_64
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62613..63569)
DNA (957bp) protein (319aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta'''' n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287FE03
Conserved domain protein {ECO:0000313|EMBL:EFR33805.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_65
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63560..63859)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287EE8D
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33813.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nitrogen regulatory protein P-II family protein
71_007_scaffold_9_66
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63868..64194)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289CE4A
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33788.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_9_67
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64182..64799)
DNA (618bp) protein (206aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
thymidylate kinase family protein; K00943 dTMP kinase [EC:2.7.4.9]
thymidylate kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028951C9
71_007_scaffold_9_68
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64784..66148)
DNA (1365bp) protein (455aa)
ornithine decarboxylase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A0CC0
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFR33782.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Orn/Lys/Arg decarboxylase
71_007_scaffold_9_69
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66210..67190)
DNA (981bp) protein (327aa)
birA; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
biotin-(acetyl-CoA carboxylase) ligase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889EB3
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_trna_2
unknown

Not on your lists

67250..67336
DNA (87bp)
transferRNA Ser
71_007_scaffold_9_70
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67608..68351)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289CFCA
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33828.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_71
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68293..69183)
DNA (891bp) protein (297aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288D78A
71_007_scaffold_9_72
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69406..69672)
DNA (267bp) protein (89aa)
veg n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002893202
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33787.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
veg; veg
71_007_scaffold_9_73
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69963..71024
DNA (1062bp) protein (354aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
thiouridylase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A3135
71_007_scaffold_9_74
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


71048..71686
DNA (639bp) protein (213aa)
50S ribosomal protein L25 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289CE81
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25
71_007_scaffold_9_75
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71739..72419)
DNA (681bp) protein (227aa)
haloacid dehalogenase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289BB50
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EFR33798.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein
71_007_scaffold_9_76
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72394..73731)
DNA (1338bp) protein (446aa)
PHP domain protein {ECO:0000313|EMBL:EFH92674.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFH92674.1};; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028993FB
hypothetical protein
71_007_scaffold_9_77
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73792..75099)
DNA (1308bp) protein (436aa)
ABC transporter substrate-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288DFF3
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFH92675.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
71_007_scaffold_9_78
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75141..75962)
DNA (822bp) protein (274aa)
ABC transporter permease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D6BD
ABC transporter, permease protein {ECO:0000313|EMBL:EFH92676.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein
71_007_scaffold_9_79
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75929..76852)
DNA (924bp) protein (308aa)
ABC transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002897B07
ABC transporter, permease protein {ECO:0000313|EMBL:EFH92677.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
ABC transporter permease; K02025 multiple sugar transport system permease protein
71_007_scaffold_9_80
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(76842..77918)
DNA (1077bp) protein (359aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028992FF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC90085.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
msmX; sugar ABC transporter ATPase; K10112 maltose/maltodextrin transport system ATP-binding protein
71_007_scaffold_9_81
unknown

Not on your lists

78167..78529
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289D553
71_007_scaffold_9_82
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(78503..79009)
DNA (507bp) protein (169aa)
single-stranded DNA-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289C44E
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
smpB; SsrA-binding protein; K03664 SsrA-binding protein
71_007_scaffold_9_83
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79002..81104)
DNA (2103bp) protein (701aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
exoribonuclease II (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-]
ribonuclease R n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002887A0E
71_007_scaffold_9_84
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81104..82276)
DNA (1173bp) protein (391aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288841F
71_007_scaffold_9_85
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82276..83835)
DNA (1560bp) protein (520aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramyl peptide synthase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028926E3
71_007_scaffold_9_86
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83845..84615)
DNA (771bp) protein (257aa)
carboxylic ester hydrolase (EC:3.1.1.-)
alpha/beta hydrolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289787B
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EFR32623.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_87
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84602..85033)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288E14D
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32556.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_9_88
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85140..85412
DNA (273bp) protein (91aa)
glutaredoxin n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028961BE
Glutaredoxin {ECO:0000313|EMBL:EFR32603.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
glutaredoxin
Displaying items 61-90 of 170 in total

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