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71_007_scaffold_37

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Displaying items 31-60 of 92 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_37_29
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31034..32362)
DNA (1329bp) protein (443aa)
TrkH family potassium uptake protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028933B3
Ktr system potassium uptake protein B {ECO:0000313|EMBL:EFR32997.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ktrB; potassium transporter ATPase; K03498 trk system potassium uptake protein TrkH
71_007_scaffold_37_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32426..32776)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002893BAF
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
71_007_scaffold_37_31
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32789..32980)
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289E4C6
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
71_007_scaffold_37_32
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32992..33579)
DNA (588bp) protein (196aa)
translation initiation factor IF-3 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002898A9B
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
translation initiation factor IF-3; K02520 translation initiation factor IF-3
71_007_scaffold_37_33
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33683..34300)
DNA (618bp) protein (206aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
uridine kinase; K00876 uridine kinase [EC:2.7.1.48]
uridine/cytidine kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289872B
71_007_scaffold_37_34
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34290..35519)
DNA (1230bp) protein (410aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFR33222.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR33222.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
collagenase family protease; K08303 putative protease [EC:3.4.-.-]
peptidase U32 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002892387
71_007_scaffold_37_35
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35476..36162)
DNA (687bp) protein (229aa)
O-methyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288EC47
O-methyltransferase {ECO:0000313|EMBL:EFR33270.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
O-methyltransferase
71_007_scaffold_37_36
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36205..37866)
DNA (1662bp) protein (554aa)
Ribonuclease J 1 {ECO:0000313|EMBL:EFR33213.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFR33213.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rnjA; ribonuclease j1; K12574 ribonuclease J [EC:3.1.-.-]
ribonuclease J n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288B1AE
71_007_scaffold_37_37
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37866..38324)
DNA (459bp) protein (153aa)
Fur family transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002881DED
Putative ferric uptake regulator {ECO:0000313|EMBL:EFR33197.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Fe2+/Zn2+ uptake regulation protein
71_007_scaffold_37_38
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38315..38575)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002893638
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33293.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_37_39
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38585..39001)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
holliday junction resolvase (EC:3.1.-.-)
Holliday junction resolvase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C0E1
71_007_scaffold_37_40
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39050..39313)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A2149
UPF0297 protein HMPREF9286_1395 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_37_41
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(39361..41973)
DNA (2613bp) protein (871aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
alaS; alanyl-tRNA ligase AlaS (EC:6.1.1.7)
alanyl-tRNA synthase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028876A4
71_007_scaffold_37_42
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42045..43334)
DNA (1290bp) protein (430aa)
permease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288B778
Putative membrane protein {ECO:0000313|EMBL:EFR33224.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_37_43
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43303..44466)
DNA (1164bp) protein (388aa)
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7]
cysteine desulfurase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287AB65
Putative cysteine desulfurase NifS {ECO:0000313|EMBL:EFR33281.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_37_44
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44414..44869)
DNA (456bp) protein (152aa)
transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287E0C3
Putative HTH-type transcriptional regulator IscR {ECO:0000313|EMBL:EFR33286.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
AsnC family transcriptional regulator
71_007_scaffold_37_45
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44881..45336)
DNA (456bp) protein (152aa)
nitrogen-fixing protein NifU n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289C3EA
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EFR33206.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
iron-sulfur cofactor synthesis protein NifU-like protein; K04488 nitrogen fixation protein NifU and related proteins
71_007_scaffold_37_46
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45323..46375)
DNA (1053bp) protein (351aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
selenocysteine lyase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
cysteine desulfurase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028803DA
71_007_scaffold_37_47
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46344..47618)
DNA (1275bp) protein (425aa)
FeS assembly protein SufD n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289BC9F
SufB/sufD domain protein {ECO:0000313|EMBL:EFR33234.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative iron-regulated ABC transporter
71_007_scaffold_37_48
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47626..49038)
DNA (1413bp) protein (471aa)
Fe-S cluster assembly protein SufB n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889390
FeS assembly protein SufB {ECO:0000313|EMBL:EFR33221.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative iron-regulated ABC transporter ATP-binding protein; K09014 Fe-S cluster assembly protein SufB
71_007_scaffold_37_49
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49039..49785)
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028832B9
FeS assembly ATPase SufC {ECO:0000313|EMBL:EFR33246.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative iron-regulated ABC transporter ATP-binding protein; K09013 Fe-S cluster assembly ATP-binding protein
71_007_scaffold_37_50
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49911..50270)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289B72E
UPF0102 protein HMPREF9286_1405 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K07460 putative endonuclease
71_007_scaffold_37_51
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50264..50881)
DNA (618bp) protein (206aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
ribonuclease HII n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289C73F
71_007_scaffold_37_52
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50847..51719)
DNA (873bp) protein (291aa)
GTPase YlqF n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D75C
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rbgA; ribosome biogenesis GTPase A
71_007_scaffold_37_53
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51720..52526)
DNA (807bp) protein (269aa)
haloacid dehalogenase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002898AD3
HAD hydrolase, family IIB {ECO:0000313|EMBL:EFR33276.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hydrolase-like protein, HAD superfamily type 3
71_007_scaffold_37_54
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52553..53641)
DNA (1089bp) protein (363aa)
GTP-binding protein YchF n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002881FCA
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K06942
71_007_scaffold_37_55
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53891..55144
DNA (1254bp) protein (418aa)
ABC transporter ATP-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002897B0E
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR33294.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ABC transporter ATP-binding protein
71_007_scaffold_37_56
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55134..55973
DNA (840bp) protein (280aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C463
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EFR33244.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_37_57
unknown

Not on your lists

comp(56104..56370)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288BC25
71_007_scaffold_37_58
unknown

Not on your lists

comp(56380..56868)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A3D52
Displaying items 31-60 of 92 in total

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