ggKbase home page

71_007_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 92 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_37_16S_1
unknown

Not on your lists

comp(40..1560)
DNA (1521bp)
16S ribosomal RNA (16S rRNA)
71_007_scaffold_37_1
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73..393)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIB0_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_52_13
71_007_scaffold_37_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1845..2945)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289CBEC
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR33429.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_37_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2946..3707)
DNA (762bp) protein (254aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002890BBA
Putative membrane protein {ECO:0000313|EMBL:EFR33457.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_37_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3709..5421)
DNA (1713bp) protein (571aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
argS; arginyl-tRNA synthetase 2 (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
arginyl-tRNA synthetase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028955A8
71_007_scaffold_37_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5431..7803)
DNA (2373bp) protein (791aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DNA mismatch repair protein MutS n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028921B0
mutS1; DNA mismatch repair protein MutS
71_007_scaffold_37_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7796..10138)
DNA (2343bp) protein (781aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFR33498.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR33498.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
peptidase U32 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288ACA2
peptidase U32
71_007_scaffold_37_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10125..10676)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002895E71
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K09888 cell division protein ZapA
71_007_scaffold_37_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10687..13062)
DNA (2376bp) protein (792aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
pheT; phenylalanyl-tRNA ligase subunit beta PheT (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289FD3E
71_007_scaffold_37_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13073..14095)
DNA (1023bp) protein (341aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
pheS; phenylalanyl-tRNA ligase subunit alpha PheS (EC:6.1.1.20)
phenylalanyl-tRNA synthase subunit alpha n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002897D04
71_007_scaffold_37_trna_1
unknown

Not on your lists

comp(14255..14327)
DNA (73bp)
transferRNA Trp
71_007_scaffold_37_10
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14437..15027)
DNA (591bp) protein (197aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24)
dephospho-CoA kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289DB58
71_007_scaffold_37_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15014..17671)
DNA (2658bp) protein (886aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287EEB9
71_007_scaffold_37_12
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17740..18078)
DNA (339bp) protein (113aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002895304
Rhodanese-like protein {ECO:0000313|EMBL:EFA89732.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
YtwF protein
71_007_scaffold_37_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18130..18507)
DNA (378bp) protein (126aa)
endoribonuclease L-PSP n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287A77A
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EFR33020.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
endoribonuclease L-PSP; K07567 TdcF protein
71_007_scaffold_37_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18510..18860)
DNA (351bp) protein (117aa)
iojap-like protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D8E3
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
iojap-related protein
71_007_scaffold_37_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18869..19747)
DNA (879bp) protein (293aa)
transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A1E08
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EFR32981.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
lytR; transcriptional regulator
71_007_scaffold_37_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19708..20316)
DNA (609bp) protein (203aa)
phosphohydrolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289949B
Hydrolase, HD family {ECO:0000313|EMBL:EFR32967.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
metal dependent phosphohydrolase
71_007_scaffold_37_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20914..21201)
DNA (288bp) protein (96aa)
RNA-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289AD51
RNA-binding protein, YhbY family {ECO:0000313|EMBL:EFR32990.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
RNA-binding protein
71_007_scaffold_37_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21210..22478)
DNA (1269bp) protein (423aa)
GTPase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289D8B1
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
obg; GTP-binding protein Obg
71_007_scaffold_37_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22618..22914)
DNA (297bp) protein (99aa)
50S ribosomal protein L27 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889EF9
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
71_007_scaffold_37_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22907..23245)
DNA (339bp) protein (113aa)
ribosomal protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D5B4
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33009.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_37_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23245..23550)
DNA (306bp) protein (102aa)
50S ribosomal protein L21 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C60F
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
71_007_scaffold_37_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23775..25688)
DNA (1914bp) protein (638aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
threonyl-tRNA synthetase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002880CFA
71_007_scaffold_37_23
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26471..26974
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002882B65
Putative uncharacterized protein {ECO:0000313|EMBL:EGD50885.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus JW 200.;"
hypothetical protein
71_007_scaffold_37_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27086..27772)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287F3A9
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32988.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_37_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27760..28515)
DNA (756bp) protein (252aa)
spoU1; tRNA/rRNA methyltransferase SpoU (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002896AC3
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFR32991.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_37_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28569..29087)
DNA (519bp) protein (173aa)
ubiquitin-associated-domain-containing protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028885FD
UBA/TS-N domain protein {ECO:0000313|EMBL:EFR32975.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ubiquitin-associated domain-containing protein
71_007_scaffold_37_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29133..30221)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D5E6
Putative lipoprotein {ECO:0000313|EMBL:EFR32969.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_37_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30381..31031)
DNA (651bp) protein (217aa)
potassium transporter Trk n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289AE11
TrkA N-terminal domain protein {ECO:0000313|EMBL:EFR32983.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
TrkA domain-containing protein; K03499 trk system potassium uptake protein TrkA
Displaying items 1-30 of 92 in total

View Taxonomy