ggKbase home page

71_007_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 39 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_124_trna_1
unknown

Not on your lists

46..131
DNA (86bp)
transferRNA Ser
71_007_scaffold_124_trna_2
unknown

Not on your lists

199..271
DNA (73bp)
transferRNA Lys
71_007_scaffold_124_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

539..1495
DNA (957bp) protein (319aa)
Threonine dehydratase (EC:4.3.1.19)
pyridoxal-5''''-phosphate-dependent protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288871E
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:EFR32259.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_124_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1510..2691
DNA (1182bp) protein (394aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1 2.6.1.17 2.6.1.11)
aspartate aminotransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287FE3B
Putative aspartate transaminase {ECO:0000313|EMBL:EFR32257.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_124_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2912..4627)
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288FFED
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32281.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_124_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4611..5528)
DNA (918bp) protein (306aa)
nitric-oxide reductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289912F
ATPase, AAA family {ECO:0000313|EMBL:EFR32292.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nitric-oxide reductase
71_007_scaffold_124_5
unknown

Not on your lists

5631..5738
DNA (108bp) protein (36aa)

This feature has no annotations

71_007_scaffold_124_6
unknown

Not on your lists

5755..5880
DNA (126bp) protein (42aa)

This feature has no annotations

71_007_scaffold_124_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6127..7413
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EFR32266.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EFR32266.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288D31C
71_007_scaffold_124_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7638..10337
DNA (2700bp) protein (900aa)
calcium-transporting P-type ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
ATPase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288413A
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EFR32280.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_124_9
unknown

Not on your lists

comp(10381..10668)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A0B36
71_007_scaffold_124_10
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

10786..11793
DNA (1008bp) protein (336aa)
CAAX amino terminal protease n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031D2D0A
CAAX amino terminal protease family protein {ECO:0000313|EMBL:AHZ59491.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
CAAX amino terminal protease family.
71_007_scaffold_124_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11900..12289
DNA (390bp) protein (130aa)
GntR family transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028930D8
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFR32306.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
transcriptional regulator, gntR family protein
71_007_scaffold_124_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12277..13131
DNA (855bp) protein (285aa)
ABC transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002890E79
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR32302.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
transporter; K01990 ABC-2 type transport system ATP-binding protein
71_007_scaffold_124_13
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

13113..13748
DNA (636bp) protein (212aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028921ED
Putative membrane protein {ECO:0000313|EMBL:AHZ59511.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
71_007_scaffold_124_14
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

13730..14368
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287E529
Uncharacterized protein {ECO:0000313|EMBL:AHZ59513.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
71_007_scaffold_124_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14520..15845
DNA (1326bp) protein (442aa)
adenine permease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289012D
Putative permease {ECO:0000313|EMBL:EFR32260.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
xanthine/uracil permease family protein; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
71_007_scaffold_124_16
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

16004..16681
DNA (678bp) protein (226aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH75649.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
71_007_scaffold_124_17
unknown

Not on your lists

16681..17133
DNA (453bp) protein (151aa)

This feature has no annotations

71_007_scaffold_124_18
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

17199..18761
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289724A
Uncharacterized protein {ECO:0000313|EMBL:AHZ59527.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
S-layer homology domain containing protein
71_007_scaffold_124_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18778..20253
DNA (1476bp) protein (492aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
glutamyl-tRNA synthetase family protein; K09698 nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
glutamyl-tRNA synthetase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289C44C
71_007_scaffold_124_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20451..21743
DNA (1293bp) protein (431aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
phosphoglycerate kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D451
71_007_scaffold_124_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21707..22390
DNA (684bp) protein (228aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
triosephosphate isomerase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002883BE8
71_007_scaffold_124_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22372..23874
DNA (1503bp) protein (501aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
phosphoglyceromutase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002891652
71_007_scaffold_124_23
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23883..25193
DNA (1311bp) protein (437aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
eno; enolase (EC:4.2.1.11)
enolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028985CF
71_007_scaffold_124_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25175..25573
DNA (399bp) protein (133aa)
hypothetical protein; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
phosphohistidine phosphatase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287E160
Putative phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EFR33492.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_124_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25770..27269
DNA (1500bp) protein (500aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288F0BC
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
putative virulence factor MviN; K03980 virulence factor
71_007_scaffold_124_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27340..27663
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028845BB
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33480.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_124_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27820..31569
DNA (3750bp) protein (1250aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002899624
71_007_scaffold_124_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31609..35196
DNA (3588bp) protein (1196aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002892105
Displaying items 1-30 of 39 in total

View Taxonomy