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71_007_scaffold_171

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_171_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..316
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288551F
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33072.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K10254 myosin-crossreactive antigen
71_007_scaffold_171_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(724..2469)
DNA (1746bp) protein (582aa)
thiamine ABC transporter permease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A18D3
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR33287.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
multidrug ABC transporter
71_007_scaffold_171_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2618..4219
DNA (1602bp) protein (534aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289AFE3
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
integral membrane protein MviN; K03980 virulence factor
71_007_scaffold_171_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4341..5153
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002894C87
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33274.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
188.t00012; HMG box protein
71_007_scaffold_171_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5280..5771
DNA (492bp) protein (164aa)
phosphohydrolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288CC11
HD domain protein {ECO:0000313|EMBL:EFR33262.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_007_scaffold_171_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6137..6448
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A1053
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33187.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_171_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6490..6861)
DNA (372bp) protein (124aa)
ABC transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028999DA
multidrug ABC transporter
Multidrug ABC transporter {ECO:0000313|EMBL:EXF27877.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
71_007_scaffold_171_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7060..8253)
DNA (1194bp) protein (398aa)
ABC transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028999DA
ABC transporter {ECO:0000313|EMBL:KAJ50214.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
antibiotic ABC transporter ATP-binding protein
71_007_scaffold_171_9
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8276..10060)
DNA (1785bp) protein (595aa)
ABC transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002899930
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter related {ECO:0000313|EMBL:ADL52809.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
71_007_scaffold_171_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10173..11906)
DNA (1734bp) protein (578aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
pyk; pyruvate kinase Pyk (EC:2.7.1.40)
pyruvate kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289F2B5
71_007_scaffold_171_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11885..12868)
DNA (984bp) protein (328aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028899F9
71_007_scaffold_171_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12884..16312)
DNA (3429bp) protein (1143aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288DF1E
71_007_scaffold_171_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16485..16751)
DNA (267bp) protein (89aa)
HPr kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889CE8
HPr-like protein crh {ECO:0000313|EMBL:EFR33284.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
crh; catabolite repression HPr-like protein
71_007_scaffold_171_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16753..17688)
DNA (936bp) protein (312aa)
sporulation protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A3E95
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K09762 hypothetical protein
71_007_scaffold_171_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17897..18979)
DNA (1083bp) protein (361aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rotamase, PpiC-type (EC:5.2.1.8)
foldase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002886C03
71_007_scaffold_171_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19029..22508)
DNA (3480bp) protein (1160aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
mfd; transcription-repair coupling factor (EC:3.6.4.-)
transcription-repair coupling factor n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002893069
71_007_scaffold_171_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22496..23086)
DNA (591bp) protein (197aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
peptidyl-tRNA hydrolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028833F7
71_007_scaffold_171_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23096..24046)
DNA (951bp) protein (317aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus h
prsA; ribose-phosphate pyrophosphokinase PrsA (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C78F
71_007_scaffold_171_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24056..25435)
DNA (1380bp) protein (460aa)
glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase GlmU (EC:2.7.7.23 2.3.1.157)
N-acetylglucosamine-1-phosphate uridyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028880BA
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_007_scaffold_171_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25918..26808
DNA (891bp) protein (297aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
cysteine synthase A; K01738 cysteine synthase A [EC:2.5.1.47]
cysteine synthase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002885255
71_007_scaffold_171_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26801..27352
DNA (552bp) protein (184aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
serine O-acetyltransferase (EC:2.3.1.30)
serine acetyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288B0B9
71_007_scaffold_171_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27372..28202
DNA (831bp) protein (277aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
AP endonuclease, family 2; K01151 deoxyribonuclease IV [EC:3.1.21.2]
endonuclease IV n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002881AF5
71_007_scaffold_171_23
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28297..28407
DNA (111bp) protein (37aa)
Uncharacterized protein (Fragment) n=2 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFA90345.1}; Flags: Fragment;; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
hypothetical protein
Displaying 23 items

View Taxonomy