ggKbase home page

71_007_scaffold_792

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_792_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


3..89
DNA (87bp) protein (29aa)
UPI0003D68780 related cluster n=1 Tax=unknown RepID=UPI0003D68780
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rpsH; putative 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
71_007_scaffold_792_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


105..644
DNA (540bp) protein (180aa)
UPI0003D650D6 related cluster n=1 Tax=unknown RepID=UPI0003D650D6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6
71_007_scaffold_792_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


665..1030
DNA (366bp) protein (122aa)
UPI0003D684EF related cluster n=1 Tax=unknown RepID=UPI0003D684EF
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosomal protein L18; K02881 large subunit ribosomal protein L18
71_007_scaffold_792_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


1050..1550
DNA (501bp) protein (167aa)
UPI0003D63824 related cluster n=1 Tax=unknown RepID=UPI0003D63824
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
71_007_scaffold_792_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


1562..1747
DNA (186bp) protein (62aa)
UPI0003D5B712 related cluster n=1 Tax=unknown RepID=UPI0003D5B712
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
71_007_scaffold_792_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


1760..2200
DNA (441bp) protein (147aa)
UPI0003D5F830 related cluster n=1 Tax=unknown RepID=UPI0003D5F830
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosomal protein L15; K02876 large subunit ribosomal protein L15
71_007_scaffold_792_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2200..3462
DNA (1263bp) protein (421aa)
UPI0003D659FD related cluster n=1 Tax=unknown RepID=UPI0003D659FD
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
71_007_scaffold_792_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3476..4132
DNA (657bp) protein (219aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|SAAS:SAAS00079673};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" sour
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
UPI0003D5BC5F related cluster n=1 Tax=unknown RepID=UPI0003D5BC5F
71_007_scaffold_792_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4129..4881
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
UPI0003D5F5E6 related cluster n=1 Tax=unknown RepID=UPI0003D5F5E6
71_007_scaffold_792_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4878..5198
DNA (321bp) protein (107aa)
UPI0003D5A78A related cluster n=1 Tax=unknown RepID=UPI0003D5A78A
Ribosomal protein L14E {ECO:0000313|EMBL:ETI86069.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
71_007_scaffold_792_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5176..5394
DNA (219bp) protein (73aa)
UPI0003D65E07 related cluster n=1 Tax=unknown RepID=UPI0003D65E07
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
71_007_scaffold_792_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5418..5531
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=3 Tax=Dialister RepID=H1D143_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
71_007_scaffold_792_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


5552..5881
DNA (330bp) protein (110aa)
UPI0003D5C6DB related cluster n=1 Tax=unknown RepID=UPI0003D5C6DB
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
Displaying 13 items

View Taxonomy