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71_008_scaffold_56

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Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_56_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..637
DNA (636bp) protein (212aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ilvC1; ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=7 Tax=Bifidobacterium bifidum RepID=E3ELJ5_BIFBS
71_008_scaffold_56_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(945..2207)
DNA (1263bp) protein (421aa)
Sel1 domain-containing protein (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YU62_9PROT
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30225.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein; K07126
71_008_scaffold_56_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2497..2742
DNA (246bp) protein (82aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ilvC1; ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=4 Tax=Bifidobacterium breve RepID=F6C614_BIFBA
71_008_scaffold_56_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2735..3586
DNA (852bp) protein (284aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ilvC; ketol-acid reductoisomerase/2-dehydropantoate 2-reductase IlvC (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYI4_BIFBP
71_008_scaffold_56_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4031..4558
DNA (528bp) protein (176aa)
Glycosyl transferase family 2 n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HA63_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30227.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
family 2 glycosyl transferase
71_008_scaffold_56_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4849..6750)
DNA (1902bp) protein (634aa)
hypothetical protein; K05970 sialate O-acetylesterase [EC:3.1.1.53]
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C5D5_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30228.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_008_scaffold_56_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6807..8111)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C5D4_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30229.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_008_scaffold_56_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8528..9919
DNA (1392bp) protein (464aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
beta-galactosidase; K05350 beta-glucosidase [EC:3.2.1.21]
Bifunctional beta-D-glucosidase/beta-D-fucosidase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AKQ3_BIFBR
71_008_scaffold_56_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9994..12099
DNA (2106bp) protein (702aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
beta-galactosidase; K12308 beta-galactosidase [EC:3.2.1.23]
BgaP n=1 Tax=Lactobacillus shenzhenensis LY-73 RepID=U4TL99_9LACO
71_008_scaffold_56_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12787..14652)
DNA (1866bp) protein (622aa)
ABC transporter {ECO:0000313|EMBL:KFI93637.1}; EC=3.6.3.43 {ECO:0000313|EMBL:KFI93637.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Probable ABC transporter protein ATP-binding component n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE85_9FIRM
ABC-type multidrug transport system, ATPase and permease components
71_008_scaffold_56_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15194..16588
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI0003653EAB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30234.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar ABC transporter substrate-binding protein
71_008_scaffold_56_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16742..17791
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI00036E0FD9
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30235.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar ABC transporter permease
71_008_scaffold_56_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17788..18684
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI000371678C
Sugar ABC transporter permease {ECO:0000313|EMBL:KFI93634.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
binding-protein-dependent transport systems inner membrane component
71_008_scaffold_56_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18812..21502
DNA (2691bp) protein (897aa)
glycosyl hydrolase family 2, sugar binding domain protein; K01192 beta-mannosidase [EC:3.2.1.25]
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRH9_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30237.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_008_scaffold_56_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21608..22633
DNA (1026bp) protein (342aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium breve RepID=F6C5B0_BIFBA
Bacterial regulatory protein, LacI family {ECO:0000313|EMBL:KFI93632.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
bacterial regulatory protein, LacI family
71_008_scaffold_56_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22710..23384)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI00037F7D66
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30239.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
transferase
71_008_scaffold_56_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23481..24251)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI00035E851B
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30240.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_008_scaffold_56_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24373..26556
DNA (2184bp) protein (728aa)
agl1; alpha-glucosidase (EC:3.2.1.3); K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
AglL Glycosyl hydrolases family 31, Alpha-glucosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7F3_BIFDB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30241.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_008_scaffold_56_19
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26608..28872
DNA (2265bp) protein (755aa)
Alpha-galactosidase {ECO:0000313|EMBL:KFI48066.1}; EC=3.2.1.22 {ECO:0000313|EMBL:KFI48066.1};; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
alpha-galactosidase (EC:3.2.1.22); K07407 alpha-galactosidase [EC:3.2.1.22]
alpha-galactosidase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5C375
71_008_scaffold_56_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29021..30190
DNA (1170bp) protein (390aa)
Mannosidase {ECO:0000313|EMBL:KFI93628.1}; EC=3.2.1.78 {ECO:0000313|EMBL:KFI93628.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
mannosidase (EC:3.2.1.78)
Mannosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7C3_BIFDB
71_008_scaffold_56_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30534..33026
DNA (2493bp) protein (831aa)
Alpha-galactosidase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A990_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30245.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
alpha-galactosidase
71_008_scaffold_56_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33481..34755
DNA (1275bp) protein (425aa)
Beta-lactamase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B3K0_9CLOT
Beta-lactamase {ECO:0000313|EMBL:KFI93626.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Beta-lactamase class C and other penicillin binding proteins
71_008_scaffold_56_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34990..37377)
DNA (2388bp) protein (796aa)
Mannan endo-1,4-beta-mannosidase., Cellulase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A470_CELGA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30247.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Mannan endo-1,4-beta-mannosidase., Cellulase
71_008_scaffold_56_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37737..41588)
DNA (3852bp) protein (1284aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
lacZ1; beta-galactosidase P1; K01190 beta-galactosidase [EC:3.2.1.23]
Beta-galactosidase P1 n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELJ8_BIFBS
71_008_scaffold_56_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41685..42839
DNA (1155bp) protein (385aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GJJ9_9FIRM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30249.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
AraC-type DNA-binding domain-containing proteins
71_008_scaffold_56_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42857..44335)
DNA (1479bp) protein (493aa)
Aromatic amino acid transport protein n=2 Tax=Bifidobacterium bifidum RepID=I3WFT0_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30250.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ansP; aromatic amino acid transport protein
71_008_scaffold_56_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44332..45057)
DNA (726bp) protein (242aa)
Transcriptional regulator, TetR family n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWC1_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30251.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
acrr-type transcriptional regulator
71_008_scaffold_56_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45380..46081
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI93620.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KFI93620.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ATP binding protein of ABC transporter n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7U1_BIFLO
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
71_008_scaffold_56_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46090..49596
DNA (3507bp) protein (1169aa)
Permease protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCG7_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KFI93619.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
71_008_scaffold_56_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49906..51456
DNA (1551bp) protein (517aa)
Amino acid transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWA1_BIFL1
Amino acid transport protein {ECO:0000313|EMBL:KFI93618.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
amino acid transport protein; K03293 amino acid transporter, AAT family
Displaying items 1-30 of 117 in total

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