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71_008_scaffold_471

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_471_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(403..852)
DNA (450bp) protein (150aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=V6XZY4_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30882.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_008_scaffold_471_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1075..1440
DNA (366bp) protein (122aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU63_BIFLS
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KFI91360.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_008_scaffold_471_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1570..2904)
DNA (1335bp) protein (445aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriale
purT; phosphoribosylglycinamide formyltransferase 2 (EC:4.1.1.21); K08289 phosphoribosylglycinamide formyltransferase 2 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E7Z6_BIFLI
71_008_scaffold_471_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3041..4234
DNA (1194bp) protein (398aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAV6_BIFBI
Glycosyl transferase {ECO:0000313|EMBL:KFI91358.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
rfaG; putative glycosyl transferase
71_008_scaffold_471_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4305..5342)
DNA (1038bp) protein (346aa)
Amino acid lyase {ECO:0000313|EMBL:KFI91357.1}; EC=4.1.2.48 {ECO:0000313|EMBL:KFI91357.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
tal; low specificity-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5]
Possible low specificity-threonine aldolase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0S5_BIFAA
71_008_scaffold_471_trna_1
unknown

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comp(5529..5601)
DNA (73bp)
transferRNA His
71_008_scaffold_471_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6297..7910)
DNA (1614bp) protein (538aa)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KFI91356.1}; EC=3.4.11.9 {ECO:0000313|EMBL:KFI91356.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Peptidase M24 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H371_CELFA
71_008_scaffold_471_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8077..9225)
DNA (1149bp) protein (383aa)
Aminotransferase class V n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0R6L6_MYCS2
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30888.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
aminotransferase class V
71_008_scaffold_471_8
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9695..10066
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=43 Tax=Bifidobacteriaceae RepID=RS12_BIFLO
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1261057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7275.;"
71_008_scaffold_471_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10072..10542
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=RS7_BIFLS
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
71_008_scaffold_471_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10573..12702
DNA (2130bp) protein (710aa)
Elongation factor G n=8 Tax=Bifidobacterium RepID=E3EN23_BIFBS
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
fusA; translation elongation factor G; K02355 elongation factor G
71_008_scaffold_471_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12873..13856
DNA (984bp) protein (328aa)
Elongation factor Tu n=6 Tax=Bifidobacterium bifidum RepID=E3EN22_BIFBS
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
tuf; translation elongation factor Tu
Displaying 12 items

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