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71_008_scaffold_63

Search features with annotation key words

Displaying items 31-59 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_63_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29341..30819
DNA (1479bp) protein (493aa)
Histidine kinase sensor of two component system n=4 Tax=Bifidobacterium bifidum RepID=E4NYS4_BIFBP
histidine kinase sensor
Histidine kinase sensor of two component system {ECO:0000313|EMBL:KFI43816.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
71_008_scaffold_63_31
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30816..31649
DNA (834bp) protein (278aa)
Response regulator of two-component system n=3 Tax=Bifidobacterium bifidum RepID=K2I5Y4_BIFBI
Two-component system response regulator {ECO:0000313|EMBL:KFI43817.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
response regulator of two-component system
71_008_scaffold_63_32
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31771..33219
DNA (1449bp) protein (483aa)
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
6-phosphogluconate dehydrogenase, decarboxylating n=4 Tax=Bifidobacterium bifidum RepID=E4NYS6_BIFBP
71_008_scaffold_63_33
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33922..34710)
DNA (789bp) protein (263aa)
pgl; 6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BZ31_BIFBI
6-phosphogluconolactonase {ECO:0000313|EMBL:ERI83474.1}; Putative 6-phosphogluconolactonase {ECO:0000313|EMBL:BAQ98701.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_63_34
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34879..35868)
DNA (990bp) protein (330aa)
Oxppcycle protein OpcA n=5 Tax=Bifidobacterium bifidum RepID=E3ER76_BIFBS
Oxppcycle protein OpcA
Outer membrane protein {ECO:0000313|EMBL:EKF16802.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
71_008_scaffold_63_35
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35865..37451)
DNA (1587bp) protein (529aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Bifidobacterium bifidum RepID=E3ER77_BIFBS
71_008_scaffold_63_36
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37563..38087)
DNA (525bp) protein (175aa)
Putative transposase n=2 Tax=Bifidobacterium bifidum RepID=I3WJL3_BIFBI
putative transposase
Putative transposase {ECO:0000313|EMBL:AFL05076.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
71_008_scaffold_63_37
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38231..38695)
DNA (465bp) protein (155aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WJL4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53654.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_008_scaffold_63_38
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38949..44720)
DNA (5772bp) protein (1924aa)
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:AFL05078.1}; EC=3.2.1.50 {ECO:0000313|EMBL:AFL05078.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
alpha-N-acetylglucosaminidase (EC:3.2.1.50)
Alpha-N-acetylglucosaminidase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJL5_BIFBI
71_008_scaffold_63_trna_2
unknown

Not on your lists

comp(45254..45338)
DNA (85bp)
transferRNA Ser
71_008_scaffold_63_39
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45425..46711)
DNA (1287bp) protein (429aa)
serS; sers seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Serine--tRNA ligase n=3 Tax=Bifidobacterium bifidum RepID=E4NYT3_BIFBP
71_008_scaffold_63_40
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47007..51800
DNA (4794bp) protein (1598aa)
Putative 5'-nucleotidase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJL7_BIFBI
putative 5'-nucleotidase
Putative 5'-nucleotidase {ECO:0000313|EMBL:AFL05080.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
71_008_scaffold_63_41
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52124..53263
DNA (1140bp) protein (380aa)
Sphingosine kinase n=5 Tax=Bifidobacterium bifidum RepID=I3WJL8_BIFBI
sphK; sphingosine kinase
Sphingosine kinase {ECO:0000313|EMBL:AFL05081.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
71_008_scaffold_63_42
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53345..54190)
DNA (846bp) protein (282aa)
transcription antiterminator, BglG family (EC:2.7.1.69); K03488 beta-glucoside operon transcriptional antiterminator
Beta-glucoside operon transcription antiterminator LicT n=2 Tax=Bifidobacterium bifidum RepID=E3ER84_BIFBS
Beta-glucoside operon transcription antiterminator LicT {ECO:0000313|EMBL:ADO53659.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_008_scaffold_63_43
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54241..56319)
DNA (2079bp) protein (693aa)
ptsM; PTS system mannose-specific transporter subunit IIBCA (EC:2.7.1.69)
Phosphotransferase system, EIIC n=3 Tax=Bifidobacterium bifidum RepID=E4VBS5_BIFBI
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EFR51040.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_008_scaffold_63_44
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56920..57531)
DNA (612bp) protein (204aa)
Putative protease n=2 Tax=Bifidobacterium RepID=E3ER86_BIFBS
protease
Putative protease {ECO:0000313|EMBL:CDB22476.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
71_008_scaffold_63_45
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57844..58095
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HS40_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50178.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Rhs family protein
71_008_scaffold_63_46
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58868..60544
DNA (1677bp) protein (559aa)
Phosphoglucomutase {ECO:0000313|EMBL:EKE50179.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EKE50179.1};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
pgm; phosphoglucomutase (EC:5.4.2.2); K01835 phosphoglucomutase [EC:5.4.2.2]
Pgm Phosphoglucomutase n=5 Tax=Bifidobacterium bifidum RepID=E4NYT9_BIFBP
71_008_scaffold_63_47
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60925..62349
DNA (1425bp) protein (475aa)
pyridine nucleotide-disulfide oxidoreductase family protein (EC:1.16.1.1)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYU0_BIFBP
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ADO53665.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_008_scaffold_63_48
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62462..68434)
DNA (5973bp) protein (1991aa)
hyaluronidase (EC:3.2.1.35); K01197 hyaluronoglucosaminidase [EC:3.2.1.35]
Hyalurononglucosaminidase family protein n=3 Tax=Bifidobacterium bifidum RepID=U2DUI5_BIFBI
Hyalurononglucosaminidase family protein {ECO:0000313|EMBL:ERI83456.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_63_49
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68575..69654
DNA (1080bp) protein (360aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Rnh Ribonuclease HI n=3 Tax=Bifidobacterium bifidum RepID=E4NYU2_BIFBP
Ribonuclease H {ECO:0000313|EMBL:BAQ98717.1}; Ribonuclease HI {ECO:0000313|EMBL:ERI83455.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_63_50
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

69804..70502
DNA (699bp) protein (233aa)
rpi; ribose 5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6]
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Ribose-5-phosphate isomerase A n=7 Tax=Bifidobacterium bifidum RepID=E3ER93_BIFBS
71_008_scaffold_63_51
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70670..70759)
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2MXU1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ98719.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_63_52
unknown

Not on your lists

comp(70884..71513)
DNA (630bp) protein (210aa)

This feature has no annotations

71_008_scaffold_63_53
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71599..72999
DNA (1401bp) protein (467aa)
DNA repair protein radA n=5 Tax=Bifidobacterium RepID=E4NYU5_BIFBP
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_63_54
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73141..74400)
DNA (1260bp) protein (420aa)
ribF; riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
RibF Riboflavin kinase/FMN adenylyltransferase n=3 Tax=Bifidobacterium bifidum RepID=E4NYU6_BIFBP
Riboflavin kinase {ECO:0000313|EMBL:ERI83450.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_63_55
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74681..75973)
DNA (1293bp) protein (431aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
tRNA pseudouridine synthase B n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYU7_BIFBP
71_008_scaffold_63_56
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76016..76600)
DNA (585bp) protein (195aa)
Ribosome-binding factor A n=7 Tax=Bifidobacterium RepID=E4NZ24_BIFBP
rbfA; ribosome-binding factor A RbfA; K02834 ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_008_scaffold_63_57
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76904..77149)
DNA (246bp) protein (82aa)
Translation initiation factor IF-2 n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHN7_BIFBR
infB; protein translation Initiation Factor 2; K02519 translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying items 31-59 of 59 in total

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