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71_008_scaffold_304

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_304_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..1420
DNA (1419bp) protein (473aa)
atpA; ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
ATP synthase subunit alpha n=6 Tax=Bifidobacterium bifidum RepID=E4NZM1_BIFBP
71_008_scaffold_304_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1424..2362
DNA (939bp) protein (313aa)
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=5 Tax=Bifidobacterium bifidum RepID=E4NZM0_BIFBP
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_008_scaffold_304_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2371..3834
DNA (1464bp) protein (488aa)
atpD; ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
ATP synthase subunit beta n=6 Tax=Bifidobacterium bifidum RepID=E3EN60_BIFBS
71_008_scaffold_304_4
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3834..4136
DNA (303bp) protein (101aa)
ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
AtpC ATP synthase epsilon chain n=8 Tax=Bifidobacterium RepID=E4NZL8_BIFBP
AtpC ATP synthase epsilon chain {ECO:0000313|EMBL:CDB23080.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
71_008_scaffold_304_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4646..5200
DNA (555bp) protein (185aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Endonuclease NucS n=4 Tax=Bifidobacterium bifidum RepID=E3EN58_BIFBS
hypothetical protein
71_008_scaffold_304_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5368..6186)
DNA (819bp) protein (273aa)
Transcriptional regulator n=9 Tax=Bifidobacterium RepID=E4NZL6_BIFBP
putative transcriptional regulator, PucR family protein
Putative transcriptional regulator, PucR family protein {ECO:0000313|EMBL:AFL05211.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
71_008_scaffold_304_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6217..8337)
DNA (2121bp) protein (707aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJZ7_BIFBI
sugar ABC transporter periplasmic protein
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AFL05210.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
71_008_scaffold_304_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8462..9304
DNA (843bp) protein (281aa)
biotin-(acetyl-CoA carboxylase) ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DST0_BIFBI
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:ERI82801.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98837.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_304_9
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9483..10064)
DNA (582bp) protein (194aa)
BioY protein n=5 Tax=Bifidobacterium RepID=E4NZL3_BIFBP
bioY; transmembranal protein
BioY protein {ECO:0000313|EMBL:CDB23166.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
71_008_scaffold_304_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10311..12221
DNA (1911bp) protein (637aa)
accC; acetyl-/propionyl-CoA carboxylase alpha chain; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14]
Acetyl-/propionyl-CoA carboxylase alpha chain n=4 Tax=Bifidobacterium RepID=E3EN53_BIFBS
Acetyl-/propionyl-CoA carboxylase alpha chain {ECO:0000313|EMBL:ADO53786.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_008_scaffold_304_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12221..13855
DNA (1635bp) protein (545aa)
accD; acetyl-/propionyl-CoA carboxylase subunit beta AccD (EC:6.4.1.3)
Carboxyl transferase domain protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VBF3_BIFBI
Carboxyl transferase domain protein {ECO:0000313|EMBL:EFR50918.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_008_scaffold_304_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13959..23360
DNA (9402bp) protein (3134aa)
fas; fatty acid synthase subunit alpha (EC:2.3.1.86)
MaoC-like protein n=2 Tax=Bifidobacterium bifidum RepID=E4VBF4_BIFBI
MaoC-like protein {ECO:0000313|EMBL:EFR50919.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Displaying 12 items

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