ggKbase home page

71_008_scaffold_654

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_654_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1266)
DNA (1266bp) protein (422aa)
pfl; formate acetyltransferase; K00656 formate C-acetyltransferase [EC:2.3.1.54]
Formate C-acetyltransferase {ECO:0000313|EMBL:EFR50614.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EFR50614.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Formate acetyltransferase n=5 Tax=Bifidobacterium bifidum RepID=E3EMF3_BIFBS
71_008_scaffold_654_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1386..1622)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WIQ1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR50615.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_008_scaffold_654_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1700..3397)
DNA (1698bp) protein (566aa)
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:AFL04765.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AFL04765.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
nadE; glutamine-dependent NAD(+) synthetase (EC:6.3.5.1)
Glutamine-dependent NAD(+) synthetase n=3 Tax=Bifidobacterium bifidum RepID=I3WIQ2_BIFBI
71_008_scaffold_654_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3480..4631)
DNA (1152bp) protein (384aa)
Amidohydrolase n=3 Tax=Bifidobacterium bifidum RepID=U2DQ53_BIFBI
ytnL; putative hydrolase
Amidohydrolase {ECO:0000313|EMBL:ERI83697.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98434.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_008_scaffold_654_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4668..5219)
DNA (552bp) protein (184aa)
Methionine import ATP-binding protein n=2 Tax=Bifidobacterium bifidum RepID=I3WIQ4_BIFBI
metN; methionine import ATP-binding protein
Methionine import ATP-binding protein {ECO:0000313|EMBL:AFL04767.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
71_008_scaffold_654_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5371..6222
DNA (852bp) protein (284aa)
Hydrolase (HAD superfamily) n=2 Tax=Bifidobacterium bifidum RepID=E3EMF8_BIFBS
hydrolase; K07024
Hydrolase {ECO:0000313|EMBL:EKE50620.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
71_008_scaffold_654_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6368..7444)
DNA (1077bp) protein (359aa)
peptidyl-prolyl cis-trans isomerase; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=2 Tax=Bifidobacterium RepID=C0BRZ8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDS55433.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
71_008_scaffold_654_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8142..8372
DNA (231bp) protein (77aa)
Xre-type transcriptional regulator n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HW00_BIFBI
Xre-type transcriptional regulator {ECO:0000313|EMBL:EKE50622.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Xre-type transcriptional regulator
71_008_scaffold_654_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8369..8740
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HT80_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50623.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
71_008_scaffold_654_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8737..9450
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00031E8728
Uncharacterized protein {ECO:0000313|EMBL:BAR00193.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
71_008_scaffold_654_11
unknown

Not on your lists

comp(9453..9617)
DNA (165bp) protein (55aa)

This feature has no annotations

71_008_scaffold_654_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9640..10314)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAI2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50624.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
acetyl transferase
71_008_scaffold_654_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10482..10673
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAI3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50625.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_008_scaffold_654_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10822..11967
DNA (1146bp) protein (382aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRZ1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EPD75451.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
71_008_scaffold_654_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11964..12218
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRZ0_9BIFI
Chitinase {ECO:0000313|EMBL:KIM01258.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
71_008_scaffold_654_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12215..12712
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BSA9_BIFBR
Putative transcription regulator (WhiB-related protein) {ECO:0000313|EMBL:CDS55431.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
71_008_scaffold_654_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12916..13611
DNA (696bp) protein (232aa)
Putative DNA partition protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I6Y6_BIFBI
VirC1-like protein {ECO:0000313|EMBL:CDS55430.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
parA; putative DNA partition protein
71_008_scaffold_654_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13608..13778
DNA (171bp) protein (57aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IPH3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAR03842.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
Displaying 18 items

View Taxonomy