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71_008_scaffold_2

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Displaying items 1-30 of 184 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_2_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(220..354)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NDB0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95813.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_2_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(351..1667)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5U6_BIFDB
Uncharacterized protein {ECO:0000313|EMBL:ETO95750.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_2_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1848..2270)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q4Y4_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27622.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_008_scaffold_2_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2824..5976)
DNA (3153bp) protein (1051aa)
DNA/RNA helicase (EC:3.1.21.3)
DNA/RNA helicase (DEAD/DEAH box family) n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5U4_BIFDB
PF11907 domain protein {ECO:0000313|EMBL:ETO95740.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_2_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5986..6420)
DNA (435bp) protein (145aa)
Mutator mutT protein {ECO:0000313|EMBL:ETO95850.1}; EC=3.6.1.- {ECO:0000313|EMBL:ETO95850.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Mutator mutT protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S5T9_9BIFI
71_008_scaffold_2_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6829..7833)
DNA (1005bp) protein (335aa)
NAD-dependent oxidoreductase (EC:1.1.1.179)
NAD-dependent oxidoreductase n=2 Tax=Bifidobacterium dentium RepID=D2Q5U2_BIFDB
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ETO95703.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_2_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7979..8443
DNA (465bp) protein (155aa)
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:ETO95668.1}; EC=3.1.-.- {ECO:0000313|EMBL:ETO95668.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
vsr; DNA mismatch endonuclease, patch repair protein; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
DNA mismatch endonuclease Vsr n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S5U2_9BIFI
71_008_scaffold_2_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8616..9764
DNA (1149bp) protein (383aa)
aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=2 Tax=Bifidobacterium dentium RepID=E0Q4Z0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27617.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_008_scaffold_2_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9928..10896
DNA (969bp) protein (323aa)
ppx; Ppx Exopolyphosphatase (EC:3.6.1.40); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx Exopolyphosphatase n=2 Tax=Bifidobacterium dentium RepID=D2Q5T9_BIFDB
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:ETO95865.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_2_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10899..11636)
DNA (738bp) protein (246aa)
Tmp1 n=2 Tax=Bifidobacterium dentium RepID=D2Q5T8_BIFDB
PF14335 domain protein {ECO:0000313|EMBL:ETO95777.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
tmp1; Tmp1
71_008_scaffold_2_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11795..13330)
DNA (1536bp) protein (512aa)
L-fucose permease n=4 Tax=Bifidobacterium dentium RepID=D2Q5T7_BIFDB
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EFM42328.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L-fucose permease; K02429 MFS transporter, FHS family, L-fucose permease
71_008_scaffold_2_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13536..13925)
DNA (390bp) protein (130aa)
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2M8_BIFLN
Glyoxalase-like domain protein {ECO:0000313|EMBL:ETO95861.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gloA1; gloa1
71_008_scaffold_2_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14713..15417)
DNA (705bp) protein (235aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4Z5_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM42330.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
amino acid ABC transporter; K02029 polar amino acid transport system permease protein
71_008_scaffold_2_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15419..16111)
DNA (693bp) protein (231aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4Z6_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ETO95837.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ytmL; amino-acid ABC transporter permease; K02029 polar amino acid transport system permease protein
71_008_scaffold_2_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16115..16861)
DNA (747bp) protein (249aa)
L-cystine ABC transporter, ATP-binding protein TcyN {ECO:0000313|EMBL:ETO95811.1}; EC=3.6.3.- {ECO:0000313|EMBL:ETO95811.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
tcyN; L-cystine import ATP-binding protein TcyN (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4Z7_9BIFI
71_008_scaffold_2_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16895..17980)
DNA (1086bp) protein (362aa)
NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4Z8_9BIFI
NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain protein {ECO:0000313|EMBL:ETO95709.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_2_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18083..18967)
DNA (885bp) protein (295aa)
ABC transporter, substrate-binding protein, family 3 n=2 Tax=Bifidobacterium dentium RepID=E0Q4Z9_9BIFI
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ETO95733.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
amino acid ABC transporter periplasmic amino acid-binding protein; K02030 polar amino acid transport system substrate-binding protein
71_008_scaffold_2_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19164..19829)
DNA (666bp) protein (222aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium dentium RepID=E0Q500_9BIFI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETO95722.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
TetR family transcriptional regulator
71_008_scaffold_2_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20009..21274
DNA (1266bp) protein (422aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q501_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO95801.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
transporter, major facilitator family protein
71_008_scaffold_2_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21297..23000
DNA (1704bp) protein (568aa)
Hydrolase CocE/NonD family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q502_9BIFI
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:ETO95812.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hydrolase; K06978
71_008_scaffold_2_trna_2
unknown

Not on your lists

comp(23146..23218)
DNA (73bp)
transferRNA Arg
71_008_scaffold_2_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23383..24471
DNA (1089bp) protein (363aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q503_9BIFI
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:ETO95829.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
endonuclease/CDSuclease/phosphatase
71_008_scaffold_2_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24473..24760)
DNA (288bp) protein (96aa)
xseB; exodeoxyribonuclease VII small subunit XseB (EC:3.1.11.6); K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Exodeoxyribonuclease 7 small subunit n=4 Tax=Bifidobacterium dentium RepID=D2Q5S5_BIFDB
71_008_scaffold_2_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24750..26069)
DNA (1320bp) protein (440aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
xseA; exodeoxyribonuclease VII large subunit XseA (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit n=2 Tax=Bifidobacterium dentium RepID=D2Q5S4_BIFDB
71_008_scaffold_2_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26408..28807
DNA (2400bp) protein (800aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q506_9BIFI
Putative anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ETO95836.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_2_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28956..29669
DNA (714bp) protein (238aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:ETO95774.1}; EC=1.97.1.- {ECO:0000313|EMBL:ETO95774.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein; K04068 anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Bifidobacterium RepID=C0BSN6_9BIFI
71_008_scaffold_2_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29877..34751
DNA (4875bp) protein (1625aa)
Putative CoA-substrate-specific enzyme activase n=2 Tax=Bifidobacterium dentium RepID=E0Q508_9BIFI
Putative 2-hydroxyglutaryl-CoA dehydratase, D-component {ECO:0000313|EMBL:ETO95828.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hgdC; activator of (R)-2-hydroxyglutaryl-CoAdehydratase
71_008_scaffold_2_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34932..36203
DNA (1272bp) protein (424aa)
gshA; glutamate--cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2]
GshA Glutamate--cysteine ligase n=2 Tax=Bifidobacterium dentium RepID=D2Q5R6_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27597.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_008_scaffold_2_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36303..37055)
DNA (753bp) protein (251aa)
Transporter, gluconate:H+ symporter family n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S5W9_9BIFI
Na+/H+ antiporter family protein {ECO:0000313|EMBL:ETO95718.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gluconate transporter; K03299 gluconate:H+ symporter, GntP family
71_008_scaffold_2_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37129..37902)
DNA (774bp) protein (258aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.36); K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q511_9BIFI
KR domain protein {ECO:0000313|EMBL:ETO95814.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying items 1-30 of 184 in total

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