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71_008_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_136_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..429
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q649_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96226.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_136_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

426..1172
DNA (747bp) protein (249aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2QAP4_BIFDB
71_008_scaffold_136_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1267..2286
DNA (1020bp) protein (340aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
Ribose-phosphate pyrophosphokinase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAP3_BIFDB
71_008_scaffold_136_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2575..2715
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:ETO96199.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_136_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3203..5209
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1T0_BIFAA
DivIVA domain protein {ECO:0000313|EMBL:ETO96117.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_136_6
unknown

Not on your lists

5469..5768
DNA (300bp) protein (100aa)

This feature has no annotations

71_008_scaffold_136_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5778..11021)
DNA (5244bp) protein (1748aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z390_9EURY
PF09369 domain protein {ECO:0000313|EMBL:ETO96255.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DEAD/DEAH box helicase domain-containing protein
71_008_scaffold_136_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11006..12007)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3Q2G7_BIFAN
Uncharacterized protein {ECO:0000313|EMBL:ETO96375.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_136_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11988..14129)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=G2SST0_BIFAN
Uncharacterized protein {ECO:0000313|EMBL:ETO96205.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_136_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14132..15688)
DNA (1557bp) protein (519aa)
Uncharacterized protein {ECO:0000313|EMBL:ETO96271.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_136_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16208..16570
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1S5_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:ETO96142.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_136_trna_3
unknown

Not on your lists

comp(16647..16717)
DNA (71bp)
transferRNA Gln
71_008_scaffold_136_12
unknown

Not on your lists

16764..17264
DNA (501bp) protein (167aa)

This feature has no annotations

71_008_scaffold_136_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17316..18698
DNA (1383bp) protein (461aa)
glmU; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Bifunctional protein GlmU n=4 Tax=Bifidobacterium dentium RepID=D2QAM1_BIFDB
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_136_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18701..19105
DNA (405bp) protein (135aa)
Ribosomal silencing factor RsfS n=2 Tax=Bifidobacterium dentium RepID=D2QAM0_BIFDB
iojap protein family; K09710 ribosome-associated protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_008_scaffold_136_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19126..19872
DNA (747bp) protein (249aa)
phosphoglycerate mutase family protein (EC:3.1.3.73); K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q654_9BIFI
Histidine phosphatase superfamily (Branch 1) {ECO:0000313|EMBL:ETO96247.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_136_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19998..20981
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q655_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96389.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter permease
71_008_scaffold_136_trna_1
unknown

Not on your lists

21070..21142
DNA (73bp)
transferRNA Ala
71_008_scaffold_136_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21370..21774
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase family protein n=2 Tax=Bifidobacterium dentium RepID=B1S9X0_9BIFI
hypothetical protein; K07006
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27166.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_008_scaffold_136_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21851..22630)
DNA (780bp) protein (260aa)
virR; two-component response regulator virR (EC:3.1.1.61)
Two-component response regulator virR {ECO:0000313|EMBL:ADB09852.1}; EC=3.1.1.61 {ECO:0000313|EMBL:ADB09852.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Two-component response regulator virR n=2 Tax=Bifidobacterium dentium RepID=D2QAL6_BIFDB
71_008_scaffold_136_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22627..23898)
DNA (1272bp) protein (424aa)
HIT family hydrolase (EC:2.7.13.3)
Histidine kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q658_9BIFI
Histidine kinase {ECO:0000313|EMBL:ETO96319.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_136_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24134..25804
DNA (1671bp) protein (557aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q659_9BIFI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFM42133.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
cell surface protein
71_008_scaffold_136_21
unknown

Not on your lists

comp(25871..26311)
DNA (441bp) protein (147aa)

This feature has no annotations

71_008_scaffold_136_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26709..27536
DNA (828bp) protein (276aa)
phosphoglycerate mutase family protein (EC:3.1.3.73); K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ADB09849.1}; EC=3.1.3.73 {ECO:0000313|EMBL:ADB09849.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Phosphoglycerate mutase family protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N839_9BIFI
71_008_scaffold_136_23
unknown

Not on your lists

27647..27769
DNA (123bp) protein (41aa)

This feature has no annotations

71_008_scaffold_136_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27744..28694
DNA (951bp) protein (317aa)
CorA-like protein n=3 Tax=Bifidobacterium dentium RepID=B1S9X6_9BIFI
CorA-like protein {ECO:0000313|EMBL:EFM42135.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
corA; magnesium/cobalt transporter CorA; K03284 magnesium transporter
71_008_scaffold_136_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28758..29603
DNA (846bp) protein (282aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9X7_9BIFI
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ETO96259.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter substrate-binding protein
71_008_scaffold_136_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


29676..32648
DNA (2973bp) protein (991aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAL0_BIFDB
71_008_scaffold_136_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32783..33475
DNA (693bp) protein (231aa)
ComEA protein n=2 Tax=Bifidobacterium dentium RepID=E0Q664_9BIFI
Helix-hairpin-helix domain protein {ECO:0000313|EMBL:ETO96163.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
COME operon protein 1; K02237 competence protein ComEA
71_008_scaffold_136_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33472..35193
DNA (1722bp) protein (574aa)
ComEC/Rec2-like protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9Y2_9BIFI
ComEC/Rec2-like protein {ECO:0000313|EMBL:EFM42139.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
COME operon protein 3; K02238 competence protein ComEC
Displaying items 1-30 of 41 in total

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