ggKbase home page

71_008_scaffold_181_9

Organism: 71_008_Bifidobacterium_sp._MSTE12-related_59_19

near complete RP 51 / 55 MC: 7 BSCG 51 / 51 MC: 2 ASCG 14 / 38
Location: comp(11517..12920)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 467.0
  • Bit_score: 943
  • Evalue 2.60e-272
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 467.0
  • Bit_score: 943
  • Evalue 1.10e-271
3-isopropylmalate dehydratase large subunit n=3 Tax=Bifidobacterium dentium RepID=D2Q7X7_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 467.0
  • Bit_score: 943
  • Evalue 8.20e-272

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGGGAACGACATTGGCCGAGAAAGTCTGGGCCGATCATCTGGTGCGCAAAGGTAGCGATGGGGCTCCCGACCTGCTGTACATCGACCTGATGCTCATGCATGAGGTCACCAGTCCGCAGGCGTTCGAGGGCCTGCGTCTGGCTGGTCGCAAGCCGCGTCATATCGATCAGTTGATCGCCACGGAGGACCACAACACCCCCACGGTCGACATCGATCGCCCGAATCCGGACGAAACCTCCGCGCTGCAGCTGAGCACGCTGGAGAAGAACTGCAAGGAGTTCGGTGTTCGCCTGTGTCCGCTCGGCGATGCGGATCAGGGCGTGGTGCATGCGTTCGCTCCGGTACTGGGCCTTACGCAGCCGGGCATGACCATCGTGTGCGGCGATTCGCACACCTCTACGCACGGTGCGTTCGGTGCGATGGCGCTTGGCATCGGCACTTCCGAGGTCGAGCACGTCATGGCCACGCAGACGCTGAGCCTCAAGCCGTTCAAGACCATGGCCATCAATATCGAAGGCGAACTGCCGAAGGGCGTTACGGCCAAAGACATCATTCTTGCGATTATCGCGAAGATCGGCACCGGCGGTGGCCAGGGTCATGTCATCGAGTACCGCGGCGAGGCGATCAGGAAGCTGTCGATGGATGCCCGCATGACGATTTGCAACATGTCGATCGAGGCGGGTGCCCGAGCCGGCATGATTGCGCCGGATGAGGTGACGTTCGAATATCTGAAGGGCCGTCCGCACGCACCGGAAGGTGAGATGTGGGACAAGGCGGTCGAGTATTGGAAGACGCTCAAGACCGATGATGACGCCGTGTTCGATACGGAAGTGACGATCAAGGCCGAGGATCTCGAGCCATATGTGACGTGGGGCACCAACCCGGGTCAGGGCATCAGGATTTCCGGCAACGTGCCGGATCCGGAATCCTTCAACGACGAGACGGAGCGCACCGCCGCCGAACGTGCCATCGAATACATGGGGTTGAAGCCGGGCATGCCGATCAAGGACATTGCTGTCGACACCGTGTTCATCGGTTCCTGCACGAATGGCCGTCTTGAGGATCTGCGTGTGGCCGCCGCCATCATGAAGGGACATCACAAGGCCGAAAACATCCACCGCGTACTCGTGGTGCCGGCTTCCTCCCGCGTGCGTCTGCAGGCGGAGAAGGAAGGGCTCGACAAGATCTTCAAGGATTTCGGTGCCGAATGGCGTAACGCCGGTTGCTCCATGTGCCTGGGCATGAACCCGGATAAGATGGTGGCCCGCGAGCGTTCCATCTCTACGTCGAACCGTAACTTCGAAGGTCGTCAGGGCAAGGGTTCCCGCACGCATCTGGCGTCGCCAGCCGTGGCCGCCGCCACTGCGATCCGCGGTACCATCTGCTCCCCGGCCGATCTGTAA
PROTEIN sequence
Length: 468
MGTTLAEKVWADHLVRKGSDGAPDLLYIDLMLMHEVTSPQAFEGLRLAGRKPRHIDQLIATEDHNTPTVDIDRPNPDETSALQLSTLEKNCKEFGVRLCPLGDADQGVVHAFAPVLGLTQPGMTIVCGDSHTSTHGAFGAMALGIGTSEVEHVMATQTLSLKPFKTMAINIEGELPKGVTAKDIILAIIAKIGTGGGQGHVIEYRGEAIRKLSMDARMTICNMSIEAGARAGMIAPDEVTFEYLKGRPHAPEGEMWDKAVEYWKTLKTDDDAVFDTEVTIKAEDLEPYVTWGTNPGQGIRISGNVPDPESFNDETERTAAERAIEYMGLKPGMPIKDIAVDTVFIGSCTNGRLEDLRVAAAIMKGHHKAENIHRVLVVPASSRVRLQAEKEGLDKIFKDFGAEWRNAGCSMCLGMNPDKMVARERSISTSNRNFEGRQGKGSRTHLASPAVAAATAIRGTICSPADL*