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71_008_scaffold_181

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_181_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..100)
DNA (99bp) protein (33aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QB20_9BIFI
sortase-anchored surface protein
Putative sortase-anchored surface protein {ECO:0000313|EMBL:ADB08957.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_008_scaffold_181_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(355..3690)
DNA (3336bp) protein (1112aa)
Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9K6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96010.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_181_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4854..6179)
DNA (1326bp) protein (442aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
MurA UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2Q7Y4_BIFDB
71_008_scaffold_181_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6307..7434)
DNA (1128bp) protein (376aa)
pyr; pyr Dd (EC:1.3.3.1)
Pyr Dihydroorotate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=D2Q7Y3_BIFDB
Dihydroorotate oxidase domain protein {ECO:0000313|EMBL:ETO96041.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_181_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7563..8819)
DNA (1257bp) protein (419aa)
two component system histidine kinase sensor (EC:2.7.13.3)
Two component system histidine kinase sensor n=2 Tax=Bifidobacterium dentium RepID=D2Q7Y2_BIFDB
Histidine kinase {ECO:0000313|EMBL:ETO95975.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_181_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8974..9915
DNA (942bp) protein (314aa)
Two-component system response regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q7Y1_BIFDB
Response regulator receiver domain protein {ECO:0000313|EMBL:ETO96023.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
two-component system response regulator
71_008_scaffold_181_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9957..10628)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7C5_9BIFI
ATP-dependent DNA helicase RecG C-terminal domain protein {ECO:0000313|EMBL:ETO95978.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_181_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10790..11479)
DNA (690bp) protein (230aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
3-isopropylmalate dehydratase small subunit n=4 Tax=Bifidobacterium dentium RepID=D2Q7X8_BIFDB
71_008_scaffold_181_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11517..12920)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
3-isopropylmalate dehydratase large subunit n=3 Tax=Bifidobacterium dentium RepID=D2Q7X7_BIFDB
71_008_scaffold_181_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13205..14026
DNA (822bp) protein (274aa)
Transcriptional regulator, IclR family n=4 Tax=Bifidobacterium dentium RepID=D2Q7X6_BIFDB
IclR family transcriptional regulator
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EFM40641.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
71_008_scaffold_181_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14039..15577)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9L7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40642.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
71_008_scaffold_181_trna_2
unknown

Not on your lists

comp(15596..15667)
DNA (72bp)
transferRNA Gln
71_008_scaffold_181_trna_1
unknown

Not on your lists

comp(15706..15778)
DNA (73bp)
transferRNA Glu
71_008_scaffold_181_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15941..17461)
DNA (1521bp) protein (507aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=4 Tax=Bifidobacterium dentium RepID=D2Q7X4_BIFDB
71_008_scaffold_181_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17659..18660
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7D2_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB08944.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_008_scaffold_181_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18777..19787)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7D3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95955.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_008_scaffold_181_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19777..19887)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q7X1_BIFDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB08942.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_008_scaffold_181_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19896..20555)
DNA (660bp) protein (220aa)
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EFM40646.1}; EC=5.4.2.- {ECO:0000313|EMBL:EFM40646.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Phosphoglycerate mutase n=4 Tax=Bifidobacterium dentium RepID=D2Q7X0_BIFDB
phosphoglycerate mutase
71_008_scaffold_181_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20896..22320
DNA (1425bp) protein (475aa)
MFS-family transporter n=2 Tax=Bifidobacterium dentium RepID=D2Q7W9_BIFDB
MFS-family transporter
MFS-family transporter {ECO:0000313|EMBL:ADB08940.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_008_scaffold_181_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22443..22979)
DNA (537bp) protein (179aa)
GtrA-like protein n=4 Tax=Bifidobacterium dentium RepID=E1NAR7_9BIFI
hypothetical protein
GtrA-like protein {ECO:0000313|EMBL:ETO95958.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_181_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23087..23434
DNA (348bp) protein (116aa)
MIFH/DOPD protein family n=4 Tax=Bifidobacterium dentium RepID=D2Q7W7_BIFDB
MIFH/DOPD protein family
MIFH/DOPD protein family {ECO:0000313|EMBL:ADB08938.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_008_scaffold_181_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23595..25112)
DNA (1518bp) protein (506aa)
fhs; formate-tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3]
Formate-tetrahydrofolate ligase n=2 Tax=Bifidobacterium dentium RepID=D2Q7W6_BIFDB
Formate--tetrahydrofolate ligase domain protein {ECO:0000313|EMBL:ETO96018.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_181_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25203..26801)
DNA (1599bp) protein (533aa)
dipeptidase; K08659 dipeptidase [EC:3.4.-.-]
Dipeptidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7W5_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26238.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_008_scaffold_181_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26926..27483)
DNA (558bp) protein (186aa)
Raf-like protein n=2 Tax=Bifidobacterium dentium RepID=B1S7E0_9BIFI
hypothetical protein; K06910
Raf-like protein {ECO:0000313|EMBL:ETO96000.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_008_scaffold_181_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27752..29404)
DNA (1653bp) protein (551aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
PTS system, enzyme I (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q7W3_BIFDB
71_008_scaffold_181_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29689..29949
DNA (261bp) protein (87aa)
hpr; HPr family phosphocarrier (EC:2.7.3.9); K11189 phosphocarrier protein
HPr family phosphocarrier n=4 Tax=Bifidobacterium dentium RepID=D2Q7W2_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26235.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_008_scaffold_181_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30093..31106
DNA (1014bp) protein (338aa)
LacI-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7W1_BIFDB
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:ADB08932.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_008_scaffold_181_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31156..32307)
DNA (1152bp) protein (384aa)
DNA polymerase III subunit delta prime subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta prime subunit {ECO:0000313|EMBL:ADB08931.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADB08931.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
DNA polymerase III, delta' subunit n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7E4_9BIFI
71_008_scaffold_181_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32304..33062)
DNA (759bp) protein (253aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Thymidylate kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q7V9_BIFDB
71_008_scaffold_181_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33104..36118)
DNA (3015bp) protein (1005aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase 1 n=2 Tax=Bifidobacterium dentium RepID=D2Q7V8_BIFDB
Displaying items 1-30 of 31 in total

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