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71_008_scaffold_142

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_142_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4..396)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1610 Tax=Bacteria RepID=RS9_CITK8
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
71_008_scaffold_142_2

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445..828
DNA (384bp) protein (128aa)
ATPase n=1 Tax=gut metagenome RepID=J9D8Q2_9ZZZZ
ATPase {ECO:0000313|EMBL:EJX09186.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
71_008_scaffold_142_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1025..2152)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=M9HQP1_ECOLX
Cell division protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; Z ring-associated protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
yhcM; hypothetical protein; K06916
71_008_scaffold_142_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2346..2744
DNA (399bp) protein (133aa)
Inner membrane protein YhcB n=1373 Tax=Enterobacteriaceae RepID=YHCB_ECOLI
yhcB; hypothetical protein; K09908 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE57893.1}; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
71_008_scaffold_142_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2898..4265
DNA (1368bp) protein (456aa)
protease Do (EC:3.4.21.108); K04772 serine protease DegQ [EC:3.4.21.-]
Periplasmic pH-dependent serine endoprotease DegQ n=684 Tax=Enterobacteriaceae RepID=DEGQ_ECOLI
Protease DegQ {ECO:0000313|EMBL:ESD67297.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
71_008_scaffold_142_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4355..5413
DNA (1059bp) protein (353aa)
periplasmic serine protease DegS (EC:3.4.21.108); K04691 serine protease DegS [EC:3.4.21.-]
Protease degS n=1 Tax=Escherichia coli HVH 19 (4-7154984) RepID=T5SKG5_ECOLX
Protease degS {ECO:0000313|EMBL:EQX26140.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
71_008_scaffold_142_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5476..6414)
DNA (939bp) protein (313aa)
mdh; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01516, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01516, ECO:0000256|RuleBase:RU000422};; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
Malate dehydrogenase n=78 Tax=Enterobacteriaceae RepID=E0J2L4_ECOLW
71_008_scaffold_142_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6849..7319
DNA (471bp) protein (157aa)
Arginine repressor n=1032 Tax=Enterobacteriaceae RepID=ARGR_ECO24
arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
71_008_scaffold_142_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7684..7947
DNA (264bp) protein (88aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli chi7122 RepID=J7RVH6_ECOLX
yhcN; hypothetical protein
Putative exported protein {ECO:0000313|EMBL:AHY72668.1}; TaxID=1248823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H28 str. RM12581.;"
71_008_scaffold_142_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8003..8275)
DNA (273bp) protein (91aa)
Uncharacterized protein n=244 Tax=Enterobacteriaceae RepID=J7QWB0_ECOLX
hypothetical protein; K03623 ribonuclease inhibitor
Uncharacterized protein {ECO:0000313|EMBL:KDG92861.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
71_008_scaffold_142_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8367..10334)
DNA (1968bp) protein (656aa)
p-hydroxybenzoic acid efflux pump subunit AaeB n=479 Tax=Enterobacteriaceae RepID=AAEB_ECO24
p-hydroxybenzoic acid efflux pump subunit AaeB {ECO:0000256|HAMAP-Rule:MF_01545, ECO:0000256|SAAS:SAAS00166132}; Short=pHBA efflux pump protein B {ECO:0000256|HAMAP-Rule:MF_01545};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
aaeB; p-hydroxybenzoic acid efflux pump subunit aaeB; K03468 p-hydroxybenzoic acid efflux pump subunit AaeB
71_008_scaffold_142_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10340..11272)
DNA (933bp) protein (311aa)
p-hydroxybenzoic acid efflux pump subunit AaeA n=381 Tax=Enterobacteriaceae RepID=AAEA_ECO24
aaeA; p-hydroxybenzoic acid efflux subunit AaeA; K15548 p-hydroxybenzoic acid efflux pump subunit AaeA
p-hydroxybenzoic acid efflux pump subunit AaeA {ECO:0000256|HAMAP-Rule:MF_01544, ECO:0000256|SAAS:SAAS00016406}; Short=pHBA efflux pump protein A {ECO:0000256|HAMAP-Rule:MF_01544};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
71_008_scaffold_142_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11280..11483)
DNA (204bp) protein (68aa)
Uncharacterized protein n=32 Tax=Enterobacteriaceae RepID=J7Q9Z4_ECOLX
aaeX; hypothetical protein
Protein AaeX {ECO:0000256|HAMAP-Rule:MF_01546, ECO:0000256|SAAS:SAAS00052271}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
71_008_scaffold_142_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11666..12595
DNA (930bp) protein (310aa)
HTH-type transcriptional activator AaeR n=1295 Tax=Enterobacteriaceae RepID=AAER_ECO57
yhcS; putative DNA-binding transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EZA36034.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
71_008_scaffold_142_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12723..14168)
DNA (1446bp) protein (482aa)
Protein TldD n=1039 Tax=Enterobacteriaceae RepID=TLDD_ECOL6
tldD; peptidase
TldD/PmbA family protein {ECO:0000313|EMBL:ESD19945.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
71_008_scaffold_142_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14324..18124)
DNA (3801bp) protein (1267aa)
Conserved predicted membrane protein n=29 Tax=Escherichia coli RepID=C8TIE6_ECO26
Uncharacterized protein {ECO:0000313|EMBL:EZE11130.1}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
yhdP; hypothetical protein
71_008_scaffold_142_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18192..19661)
DNA (1470bp) protein (490aa)
rng; ribonuclease G; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease G n=1342 Tax=Enterobacteriaceae RepID=RNG_ECO57
Ribonuclease G (RNase G) (Cytoplasmic axial filamentprotein) {ECO:0000313|EMBL:EGI44708.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
71_008_scaffold_142_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19651..20244)
DNA (594bp) protein (198aa)
Maf-like protein YceF 2 n=427 Tax=Enterobacteriaceae RepID=YCEF2_SHISS
yhdE; Maf-like protein; K06287 septum formation protein
Maf-like protein YceF {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
71_008_scaffold_142_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20253..20741)
DNA (489bp) protein (163aa)
Rod shape-determining protein MreD n=1396 Tax=Enterobacteriaceae RepID=MRED_ECO57
mreD; rod shape-determining protein MreD; K03571 rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:KEN87728.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
71_008_scaffold_142_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20741..21844)
DNA (1104bp) protein (368aa)
Rod shape-determining protein n=418 Tax=Enterobacteriaceae RepID=C3SRP5_ECOLX
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:EII25101.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
71_008_scaffold_142_21
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21910..22953)
DNA (1044bp) protein (348aa)
Regulator of ftsI n=18 Tax=Enterobacteriaceae RepID=C3SRN8_ECOLX
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Rod shape-determining protein MreB {ECO:0000313|EMBL:ESG09705.1}; TaxID=1124962 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673.;"
71_008_scaffold_142_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23258..25198)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=238 Tax=Enterobacteriaceae RepID=J7R6E3_ECOLX
Putative lipoprotein {ECO:0000313|EMBL:EGU97096.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
regulatory protein CsrD
71_008_scaffold_142_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25350..26324
DNA (975bp) protein (325aa)
Quinone oxidoreductase, YhdH family n=579 Tax=Enterobacteriaceae RepID=A7ZSE8_ECO24
yhdH; oxidoreductase, Zn-dependent and NAD(P)-binding
YhdH, a putative quinone oxidoreductase {ECO:0000313|EMBL:AJA28254.1}; TaxID=1330457 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7 str. SS52.;"
71_008_scaffold_142_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27302..27772
DNA (471bp) protein (157aa)
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit (EC:6.4.1.2); K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1328 Tax=Enterobacteriaceae RepID=BCCP_ECO57
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EGI09649.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
71_008_scaffold_142_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27783..29132
DNA (1350bp) protein (450aa)
accC; acetyl-CoA carboxylase biotin carboxylase subunit; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:KEJ44608.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KEJ44608.1};; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Acetyl-CoA carboxylase biotin carboxylase subunit n=203 Tax=Enterobacteriaceae RepID=B6I1X6_ECOSE
71_008_scaffold_142_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29224..30270)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=50 Tax=Enterobacteriaceae RepID=C8TIF7_ECO26
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD31956.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_008_scaffold_142_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30267..31229)
DNA (963bp) protein (321aa)
Possible sugar kinase n=85 Tax=Escherichia coli RepID=C8TIF8_ECO26
sugar kinase
Sugar kinase {ECO:0000313|EMBL:EYY78553.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
71_008_scaffold_142_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31251..32240)
DNA (990bp) protein (330aa)
Ribose transport system permease protein rbsC n=67 Tax=Enterobacteriaceae RepID=E2QET3_ECOLX
ribose transport system permease protein rbsC
Sugar ABC transporter permease {ECO:0000313|EMBL:EZD31954.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_008_scaffold_142_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32241..33740)
DNA (1500bp) protein (500aa)
putative sugar uptake ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
D-ribose transporter ATP binding protein n=44 Tax=Escherichia coli RepID=V4VKW7_ECOLX
Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CEK07270.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
71_008_scaffold_142_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33801..34691)
DNA (891bp) protein (297aa)
Sugar ABC transporter n=47 Tax=Escherichia coli RepID=V4V913_ECOLX
sugar uptake ABC transporter periplasmicsolute-binding protein precursor; K10439 ribose transport system substrate-binding protein
Putative ribose ABC transporter {ECO:0000313|EMBL:CEK07271.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
Displaying items 1-30 of 49 in total

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