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71_008_scaffold_179

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_179_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..96
DNA (96bp) protein (32aa)
30S ribosomal protein S9 n=1 Tax=Salmonella gallinarum (strain 287/91 / NCTC 13346) RepID=B5REU2_SALG2
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
Ribosomal protein S9 {ECO:0000313|EMBL:ACT27587.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
71_008_scaffold_179_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491..1129
DNA (639bp) protein (213aa)
Stringent starvation protein A n=1407 Tax=Enterobacteriaceae RepID=SSPA_ECO57
sspA; stringent starvation protein A; K03599 RNA polymerase-associated protein
Glutathione S-transferase, C-terminal domain protein {ECO:0000313|EMBL:EMW93173.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
71_008_scaffold_179_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1135..1632
DNA (498bp) protein (166aa)
Stringent starvation protein B n=775 Tax=Enterobacteriaceae RepID=SSPB_ECO57
sspB; ClpXP protease specificity-enhancing factor; K03600 stringent starvation protein B
Stringent starvation protein B {ECO:0000313|EMBL:EFK74716.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
71_008_scaffold_179_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1675..3042)
DNA (1368bp) protein (456aa)
Predicted transporter DcuD n=102 Tax=Escherichia coli RepID=C8TXL6_ECO10
dcuD; transporter DcuD; K03326 C4-dicarboxylate transporter, DcuC family
Transporter, anaerobic C4-dicarboxylate uptake C family protein {ECO:0000313|EMBL:EHX23576.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
71_008_scaffold_179_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3422..4213
DNA (792bp) protein (264aa)
Transcriptional regulator NanR n=501 Tax=Escherichia coli RepID=NANR_ECO55
transcriptional regulator NanR
Transcriptional regulator NanR {ECO:0000256|HAMAP-Rule:MF_01236}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
71_008_scaffold_179_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4335..5228
DNA (894bp) protein (298aa)
nanA; N-acetylneuraminate lyase; K01639 N-acetylneuraminate lyase [EC:4.1.3.3]
N-acetylneuraminate lyase {ECO:0000256|HAMAP-Rule:MF_01237, ECO:0000256|SAAS:SAAS00021647}; Short=NAL {ECO:0000256|HAMAP-Rule:MF_01237};; Short=Neu5Ac lyase {ECO:0000256|HAMAP-Rule:MF_01237};; EC=4.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01237, ECO:0000256|SAAS:SAAS00021647};; N-acetylneuraminate pyruvate-lyase {ECO:0000256|HAMAP-Rule:MF_01237}; N-acetylneuraminic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01237}; Sialate lyase {ECO:0000256|HAMAP-Rule:MF_01237}; Sialic acid aldolase {ECO:0000256|HAMAP-Rule:MF_01237}
N-acetylneuraminate lyase n=1210 Tax=Enterobacteriaceae RepID=NANA_ECO24
71_008_scaffold_179_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5338..6828
DNA (1491bp) protein (497aa)
Putative sialic acid transporter n=3 Tax=Enterobacteriaceae RepID=Q3YX24_SHISS
nanT; sialic acid transporter NanT; K03290 MFS transporter, SHS family, sialic acid transporter
Putative sialic acid transporter {ECO:0000256|HAMAP-Rule:MF_01238}; Sialic acid permease {ECO:0000256|HAMAP-Rule:MF_01238}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
71_008_scaffold_179_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6876..7565
DNA (690bp) protein (230aa)
N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9); K01788 N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase (Fragment) n=1 Tax=Escherichia coli MS 153-1 RepID=E6A3Y2_ECOLX
71_008_scaffold_179_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7562..8437
DNA (876bp) protein (292aa)
N-acetylmannosamine kinase {ECO:0000256|HAMAP-Rule:MF_01234, ECO:0000256|SAAS:SAAS00009893}; EC=2.7.1.60 {ECO:0000256|HAMAP-Rule:MF_01234, ECO:0000256|SAAS:SAAS00009886};; ManNAc kinase {ECO:0000256|HAMAP-Rule:MF_01234}; N-acetyl-D-mannosamine kinase {ECO:0000256|HAMAP-Rule:MF_01234}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
N-acetylmannosamine kinase; K00885 N-acylmannosamine kinase [EC:2.7.1.60]
N-acetylmannosamine kinase n=4 Tax=Enterobacteriaceae RepID=F4NHQ4_9ENTR
71_008_scaffold_179_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8434..8898
DNA (465bp) protein (155aa)
Uncharacterized protein YhcH n=329 Tax=Enterobacteriaceae RepID=YHCH_ECOLI
yhcH; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD31991.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
71_008_scaffold_179_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8958..10070)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE210 RepID=L3E429_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EID68080.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
hypothetical protein
71_008_scaffold_179_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10254..11672)
DNA (1419bp) protein (473aa)
glutamate synthase, small subunit; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase [NADPH] small chain n=305 Tax=Bacteria RepID=GLTD_ECOLI
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:ELD96859.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
71_008_scaffold_179_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11685..16238)
DNA (4554bp) protein (1518aa)
gltB; glutamate synthase, large subunit; K00265 glutamate synthase (NADPH/NADH) large chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase [NADPH] large chain n=5 Tax=Escherichia coli RepID=L3E450_ECOLX
Putative glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:ESA66087.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_008_scaffold_179_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16820..17749
DNA (930bp) protein (310aa)
Radical SAM protein, family n=10 Tax=Escherichia coli RepID=I0VVB7_ECOLX
Radical SAM protein family {ECO:0000313|EMBL:ESA66089.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
Fe-S oxidoreductase
71_008_scaffold_179_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17845..20181
DNA (2337bp) protein (779aa)
Aerobic respiration control sensor protein ArcB n=622 Tax=Bacteria RepID=ARCB_ECOLI
Aerobic respiration control sensor protein ArcB {ECO:0000313|EMBL:ESE08287.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
aerobic respiration control sensor protein ArcB
71_008_scaffold_179_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20411..21064
DNA (654bp) protein (218aa)
DJ-1/PfpI family protein n=22 Tax=Escherichia coli RepID=I0VVB9_ECOLX
DJ-1/PfpI family protein {ECO:0000313|EMBL:EID68085.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
elbB; isoprenoid biosynthesis protein
71_008_scaffold_179_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21061..21789
DNA (729bp) protein (243aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-]
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=470 Tax=Enterobacteriaceae RepID=MTGA_ECO24
71_008_scaffold_179_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21786..22418)
DNA (633bp) protein (211aa)
Uncharacterized protein YrbL n=461 Tax=Enterobacteriaceae RepID=YRBL_ECOLI
yrbL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ83682.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
71_008_scaffold_179_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22632..22904)
DNA (273bp) protein (91aa)
Phosphocarrier protein NPr n=1436 Tax=Enterobacteriaceae RepID=PTSO_ECO57
phosphotransferase system, phosphocarrier protein HPr; K08485 phosphocarrier protein NPr
Phosphocarrier, HPr family protein {ECO:0000313|EMBL:EHU36516.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
71_008_scaffold_179_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22901..23755)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein YhbJ n=1396 Tax=Enterobacteriaceae RepID=YHBJ_ECO24
yhbJ; hypothetical protein; K06958 UPF0042 nucleotide-binding protein
RNase adapter protein RapZ {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
71_008_scaffold_179_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23801..24292)
DNA (492bp) protein (164aa)
PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
Nitrogen regulatory protein n=731 Tax=Enterobacteriaceae RepID=PTSN_ECOLI
Nitrogen regulatory protein (Enzyme IIA-NTR)(Phosphotransferase enzyme IIA component) (PTS system EIIA component) {ECO:0000313|EMBL:EGI20267.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
71_008_scaffold_179_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24410..24697)
DNA (288bp) protein (96aa)
Ribosome hibernation promoting factor n=1406 Tax=Enterobacteriaceae RepID=HPF_ECO57
yhbH; putative ribosome-associated, sigma 54 modulation protein; K05808 putative sigma-54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:ESE08280.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
71_008_scaffold_179_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24720..26153)
DNA (1434bp) protein (478aa)
RNA polymerase sigma-54 factor n=48 Tax=Escherichia coli RepID=B6I1S5_ECOSE
rpoN; RNA polymerase, sigma 54 factor; K03092 RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
71_008_scaffold_179_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26201..26926)
DNA (726bp) protein (242aa)
lptB; ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
Lipopolysaccharide export system ATP-binding protein LptB n=1395 Tax=Enterobacteriaceae RepID=LPTB_ECO57
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:EOV55143.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
71_008_scaffold_179_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26933..27490)
DNA (558bp) protein (186aa)
Lipopolysaccharide export system protein LptA n=1259 Tax=Enterobacteriaceae RepID=LPTA_ECO57
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
71_008_scaffold_179_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27459..28034)
DNA (576bp) protein (192aa)
Lipopolysaccharide export system protein LptC n=1313 Tax=Enterobacteriaceae RepID=LPTC_ECO57
lptC; hypothetical protein; K11719 lipopolysaccharide export system protein LptC
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915, ECO:0000256|PIRNR:PIRNR028513}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
71_008_scaffold_179_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28031..28597)
DNA (567bp) protein (189aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC n=721 Tax=Enterobacteriaceae RepID=KDSC_ECOL6
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:EQY81082.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
71_008_scaffold_179_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28618..29604)
DNA (987bp) protein (329aa)
kdsD; D-arabinose 5-phosphate isomerase; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13]
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Arabinose 5-phosphate isomerase KdsD n=971 Tax=Enterobacteriaceae RepID=KDSD_ECOLI
71_008_scaffold_179_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29618..30595)
DNA (978bp) protein (326aa)
Inner membrane protein YrbG n=300 Tax=Enterobacteriaceae RepID=YRBG_ECOLI
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein
Sodium/calcium exchanger protein {ECO:0000313|EMBL:EGB65512.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
71_008_scaffold_179_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30805..31614
DNA (810bp) protein (270aa)
Probable phospholipid import ATP-binding protein MlaF n=1316 Tax=Enterobacteriaceae RepID=MLAF_ECO57
ABC transporter ATP-binding protein YrbF
ABC transporter ATP-binding protein YrbF {ECO:0000313|EMBL:EOW03460.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
Displaying items 1-30 of 45 in total

View Taxonomy