ggKbase home page

71_008_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 66 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_218_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38..583
DNA (546bp) protein (182aa)
DNA-invertase from lambdoid prophage e14 n=6 Tax=Escherichia coli RepID=PINE_ECOLI
pinE; e14 prophage; site-specific DNA recombinase
E14 prophage, site-specific DNA recombinase {ECO:0000313|EMBL:AKF63326.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_008_scaffold_218_2
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

875..1786
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=K5FUG8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZQ62380.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
71_008_scaffold_218_3
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1993..2595
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Escherichia albertii RepID=UPI0002BA253F
Uncharacterized protein {ECO:0000313|EMBL:EWF67972.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
site-specific recombinase, phage integrase family
71_008_scaffold_218_4
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2728..3600
DNA (873bp) protein (291aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=I2YCL8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ERG20601.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
hypothetical protein
71_008_scaffold_218_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3688..3840
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Escherichia RepID=UPI0002BBA3AA
Uncharacterized protein {ECO:0000313|EMBL:EOW10774.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
hypothetical protein
71_008_scaffold_218_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4078..4488)
DNA (411bp) protein (137aa)
Transcriptional regulator n=1 Tax=Escherichia coli KTE210 RepID=L3EHL9_ECOLX
LysR substrate binding domain protein {ECO:0000313|EMBL:KDX83938.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
yagP; putative transcriptional regulator
71_008_scaffold_218_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4467..5423)
DNA (957bp) protein (319aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=I0VRH8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EID66744.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
putative xanthine dehydrogenase subunit; K07402 xanthine dehydrogenase accessory factor
71_008_scaffold_218_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5433..7631)
DNA (2199bp) protein (733aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
Oxidoreductase with molybdenum-binding domain-containing protein n=1 Tax=Escherichia coli KTE210 RepID=L3EJJ6_ECOLX
Xanthine dehydrogenase {ECO:0000313|EMBL:KHH06871.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_008_scaffold_218_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7628..8584)
DNA (957bp) protein (319aa)
FAD-binding molybdopterin dehydrogenase; K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
Molybdopterin dehydrogenase FAD-binding protein n=2 Tax=Escherichia coli RepID=I0VR08_ECOLX
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:EID66574.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
71_008_scaffold_218_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8581..9270)
DNA (690bp) protein (230aa)
Aldehyde oxidoreductase {ECO:0000313|EMBL:AIZ85831.1}; PaoABC aldehyde oxidoreductase, 2Fe-2S subunit {ECO:0000313|EMBL:CCQ27192.2}; Putative xanthine dehydrogenase {ECO:0000313|EMBL:CCJ42764.1}; EC=1.1.1.20 {ECO:0000313|EMBL:CCJ42764.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Aldehyde oxidoreductase 2Fe-2S subunit n=209 Tax=Enterobacteriaceae RepID=J9ZR67_ECO14
aldehyde oxidoreductase 2Fe-2S subunit
71_008_scaffold_218_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9688..10302
DNA (615bp) protein (205aa)
Inner membrane protein YagU n=800 Tax=Gammaproteobacteria RepID=YAGU_ECO57
yagU; hypothetical protein; K08996 putative membrane protein
Inner membrane protein yagU {ECO:0000313|EMBL:EQN33470.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
71_008_scaffold_218_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11192..11902)
DNA (711bp) protein (237aa)
Uncharacterized protein n=346 Tax=Enterobacteriaceae RepID=J7Q683_ECOLX
ecpE; chaperone
Uncharacterized protein {ECO:0000313|EMBL:EHW25102.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_008_scaffold_218_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11871..13514)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=I0VR12_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EID66578.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
hypothetical protein
71_008_scaffold_218_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13504..16029)
DNA (2526bp) protein (842aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=A7ZI25_ECO24
Uncharacterized protein {ECO:0000313|EMBL:ABV16647.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
hypothetical protein
71_008_scaffold_218_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16055..16723)
DNA (669bp) protein (223aa)
Uncharacterized protein MatC n=339 Tax=Enterobacteriaceae RepID=MATC_ECO24
matC; putative chaperone
Uncharacterized protein {ECO:0000313|EMBL:KDU29867.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
71_008_scaffold_218_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16781..17368)
DNA (588bp) protein (196aa)
Fimbrillin MatB homolog n=485 Tax=Escherichia RepID=MATB_ECO57
ecpA; common pilus
Common pilus major fimbrillin subunit EcpA {ECO:0000256|PIRNR:PIRNR007320}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
71_008_scaffold_218_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17443..17985)
DNA (543bp) protein (181aa)
HTH-type transcriptional regulator MatA n=248 Tax=Enterobacteriaceae RepID=MATA_ECO55
transcriptional regulator
Putative uncharacterized protein {ECO:0000313|EMBL:EFE64312.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_008_scaffold_218_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19070..19210)
DNA (141bp) protein (47aa)
50S ribosomal protein L36 2 n=1294 Tax=Enterobacteriaceae RepID=RL362_ECO24
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
71_008_scaffold_218_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19210..19476)
DNA (267bp) protein (89aa)
50S ribosomal protein L31 type B n=3 Tax=Escherichia coli RepID=B3H9T9_ECOLX
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
71_008_scaffold_218_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19836..19937)
DNA (102bp) protein (34aa)
Uncharacterized membrane protein YkgR n=522 Tax=Escherichia RepID=YKGR_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELC91921.1}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
71_008_scaffold_218_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21053..25306
DNA (4254bp) protein (1418aa)
Adhesin n=31 Tax=Escherichia coli RepID=D6HSI3_ECOLX
Adhesin {ECO:0000313|EMBL:EFE64315.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
adhesin
71_008_scaffold_218_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25427..26284)
DNA (858bp) protein (286aa)
Putatve transcriptional regulator ykgA n=88 Tax=Escherichia coli RepID=B7L429_ECO55
Putative transcriptional regulator ykgA
HTH-type transcriptional regulator ykgA {ECO:0000313|EMBL:EFE64316.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
71_008_scaffold_218_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26874..27467)
DNA (594bp) protein (198aa)
Uncharacterized protein n=280 Tax=Escherichia coli RepID=J7QXK1_ECOLX
hypothetical protein
Inner membrane protein ykgB {ECO:0000313|EMBL:EMX32871.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
71_008_scaffold_218_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27824..29149)
DNA (1326bp) protein (442aa)
Pyridine nucleotide-disulfide oxidoreductase n=103 Tax=Enterobacteriaceae RepID=D7X1Z4_ECOLX
ykgC; pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ESA94652.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
71_008_scaffold_218_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29375..30229
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=39 Tax=Escherichia coli RepID=E9TAT8_ECOLX
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ESA75782.1}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
ykgD; putative DNA-binding transcriptional regulator
71_008_scaffold_218_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30743..31462
DNA (720bp) protein (240aa)
Oxidoreductase n=3 Tax=Escherichia coli RepID=L3PEJ8_ECOLX
Oxidoreductase {ECO:0000313|EMBL:ELE46551.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
ykgE; oxidoreductase
71_008_scaffold_218_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31473..32900
DNA (1428bp) protein (476aa)
Iron-sulfur cluster-binding protein n=26 Tax=Escherichia coli RepID=D8EM56_ECOLX
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EID66592.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
iron-sulfur cluster binding protein
71_008_scaffold_218_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32893..33588
DNA (696bp) protein (232aa)
Predicted transporter n=95 Tax=Escherichia coli RepID=C8TI03_ECO26
ykgG; putative transporter; K00782 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV61721.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
71_008_scaffold_218_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33834..34499)
DNA (666bp) protein (222aa)
G-rich domain on tyrosine kinase family protein n=41 Tax=Escherichia coli RepID=M8QWN8_ECOLX
Inner membrane protein {ECO:0000313|EMBL:ESP10176.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
ykgH; putative inner membrane protein
71_008_scaffold_218_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34712..36382)
DNA (1671bp) protein (557aa)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1]
Oxygen-dependent choline dehydrogenase n=21 Tax=Escherichia coli RepID=D6HSJ2_ECOLX
Displaying items 1-30 of 66 in total

View Taxonomy