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71_008_scaffold_236

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_236_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..783
DNA (783bp) protein (261aa)
fadD; long-chain-fatty-acid-coa ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
UPI0003D61248 related cluster n=1 Tax=unknown RepID=UPI0003D61248
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KGF12090.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
71_008_scaffold_236_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(856..1452)
DNA (597bp) protein (199aa)
UPI0003D5E801 related cluster n=1 Tax=unknown RepID=UPI0003D5E801
Uncharacterized protein {ECO:0000313|EMBL:KGF12089.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
71_008_scaffold_236_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1442..2395)
DNA (954bp) protein (318aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-]
UPI0003D6975C related cluster n=1 Tax=unknown RepID=UPI0003D6975C
Uncharacterized protein {ECO:0000313|EMBL:KGF12088.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
71_008_scaffold_236_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2596..3624
DNA (1029bp) protein (343aa)
UPI0003D62C0C related cluster n=1 Tax=unknown RepID=UPI0003D62C0C
Uncharacterized protein {ECO:0000313|EMBL:KGF12087.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
71_008_scaffold_236_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3624..4517
DNA (894bp) protein (298aa)
UPI0003D67857 related cluster n=1 Tax=unknown RepID=UPI0003D67857
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
71_008_scaffold_236_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4514..4990
DNA (477bp) protein (159aa)
UPI0003D60181 related cluster n=1 Tax=unknown RepID=UPI0003D60181
Rod shape-determining protein MreD {ECO:0000313|EMBL:ETI87279.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rod shape-determining protein MreD; K03571 rod shape-determining protein MreD
71_008_scaffold_236_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4992..6791
DNA (1800bp) protein (600aa)
UPI0003D6189D related cluster n=1 Tax=unknown RepID=UPI0003D6189D
Penicillin-binding protein 2 {ECO:0000313|EMBL:ETI87278.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
penicillin-binding protein 2; K05515 penicillin-binding protein 2
71_008_scaffold_236_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6807..7643
DNA (837bp) protein (279aa)
UPI0003D5CF8F related cluster n=1 Tax=unknown RepID=UPI0003D5CF8F
CobQ/CobB/MinD/ParA nucleotide binding protein {ECO:0000313|EMBL:ETI87277.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
cobQ/CobB/MinD/ParA nucleotide binding domain protein; K03609 septum site-determining protein MinD
71_008_scaffold_236_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7645..8766
DNA (1122bp) protein (374aa)
UPI0003D67894 related cluster n=1 Tax=unknown RepID=UPI0003D67894
Rod shape-determining protein RodA {ECO:0000313|EMBL:ETI87276.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rod shape-determining protein RodA; K05837 rod shape determining protein RodA
71_008_scaffold_236_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8779..10671
DNA (1893bp) protein (631aa)
UPI0003D666DF related cluster n=1 Tax=unknown RepID=UPI0003D666DF
Radical SAM protein {ECO:0000313|EMBL:ETI87275.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
radical SAM domain protein
71_008_scaffold_236_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10637..11356
DNA (720bp) protein (240aa)
UPI0003D5C126 related cluster n=1 Tax=unknown RepID=UPI0003D5C126
Uncharacterized protein {ECO:0000313|EMBL:ETI87274.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
71_008_scaffold_236_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11353..12780
DNA (1428bp) protein (476aa)
S1 RNA binding domain protein; K08301 ribonuclease G [EC:3.1.26.-]
UPI0003D5AA49 related cluster n=1 Tax=unknown RepID=UPI0003D5AA49
Cytoplasmic axial filament protein {ECO:0000313|EMBL:ETI87273.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
71_008_scaffold_236_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12795..13469
DNA (675bp) protein (225aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
UPI0003D5F27A related cluster n=1 Tax=unknown RepID=UPI0003D5F27A
71_008_scaffold_236_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13450..14757
DNA (1308bp) protein (436aa)
UPI0003D67523 related cluster n=1 Tax=unknown RepID=UPI0003D67523
Stage V sporulation protein E {ECO:0000313|EMBL:ETI85087.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
cell cycle protein; K03588 cell division protein FtsW
71_008_scaffold_236_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14898..16154
DNA (1257bp) protein (419aa)
UPI0003D5A2E8 related cluster n=1 Tax=unknown RepID=UPI0003D5A2E8
Uracil-xanthine permease {ECO:0000313|EMBL:ETI87169.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
uracil-xanthine permease; K02824 uracil permease
71_008_scaffold_236_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16299..16826
DNA (528bp) protein (176aa)
UPI0003D62714 related cluster n=1 Tax=unknown RepID=UPI0003D62714
Uncharacterized protein {ECO:0000313|EMBL:ETI87170.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
71_008_scaffold_236_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16895..18958
DNA (2064bp) protein (688aa)
UPI0003D62FDD related cluster n=1 Tax=unknown RepID=UPI0003D62FDD
Uncharacterized protein {ECO:0000313|EMBL:ETI87171.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
translation elongation factor G; K02355 elongation factor G
71_008_scaffold_236_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19142..19741
DNA (600bp) protein (200aa)
UPI0003D5FF02 related cluster n=1 Tax=unknown RepID=UPI0003D5FF02
Uncharacterized protein {ECO:0000313|EMBL:ETI87172.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
71_008_scaffold_236_19
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19829..20725
DNA (897bp) protein (299aa)
UPI0003D5AEBB related cluster n=1 Tax=unknown RepID=UPI0003D5AEBB
Uncharacterized protein {ECO:0000313|EMBL:KGF12077.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
71_008_scaffold_236_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20818..21273)
DNA (456bp) protein (152aa)
UPI0003D5E73E related cluster n=1 Tax=unknown RepID=UPI0003D5E73E
Uncharacterized protein {ECO:0000313|EMBL:ETI87164.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
71_008_scaffold_236_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21457..21738
DNA (282bp) protein (94aa)
UPI0003D66BD4 related cluster n=1 Tax=unknown RepID=UPI0003D66BD4
Uncharacterized protein {ECO:0000313|EMBL:ETI87165.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
71_008_scaffold_236_trna_1
unknown

Not on your lists

comp(21862..21950)
DNA (89bp)
transferRNA Ser
71_008_scaffold_236_22
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22052..22522)
DNA (471bp) protein (157aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NN68_9FIRM
cytidine and deoxycytidylate deaminase zinc-binding region
71_008_scaffold_236_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22519..23169)
DNA (651bp) protein (217aa)
UPI0003D66F2C related cluster n=1 Tax=unknown RepID=UPI0003D66F2C
Channel protein, hemolysin III family {ECO:0000313|EMBL:ETI87207.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hemolysin III family channel protein; K11068 hemolysin III
71_008_scaffold_236_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23245..23817)
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
xanthine phosphoribosyltransferase; K03816 xanthine phosphoribosyltransferase [EC:2.4.2.22]
UPI0003D5BD4F related cluster n=1 Tax=unknown RepID=UPI0003D5BD4F
71_008_scaffold_236_25
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24031..25170)
DNA (1140bp) protein (380aa)
Integrase family protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NMA8_9FIRM
Integrase family protein {ECO:0000313|EMBL:CDB98822.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
integrase family protein
71_008_scaffold_236_26
Lactobacillus equi, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25327..26793)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. HPA0509 RepID=S2Z701_9FIRM
Putative chromosome segregation ATPase {ECO:0000313|EMBL:ETA74074.1}; TaxID=1392007 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus equi DPC 6820.;"
hypothetical protein
71_008_scaffold_236_27
Dialister micraerophilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26824..27471)
DNA (648bp) protein (216aa)
Peptidase S24-like protein n=1 Tax=Dialister microaerophilus UPII 345-E RepID=E4LA79_9FIRM
Peptidase S24-like protein {ECO:0000313|EMBL:EFR42332.1}; TaxID=910314 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister microaerophilus UPII 345-E.;"
phage-like protein
71_008_scaffold_236_28
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27614..27829
DNA (216bp) protein (72aa)
Transcriptional regulator, Fis family n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UMW3_9FIRM
hypothetical protein
Transcriptional regulator, Fis family {ECO:0000313|EMBL:ERT60239.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Displaying 29 items

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