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71_008_scaffold_4

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Displaying items 1-30 of 255 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_4_1
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

63..1529
DNA (1467bp) protein (489aa)
amino acid permease rocC n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289B54C
Uncharacterized protein {ECO:0000313|EMBL:KIL37028.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
amino acid permease-associated protein
71_008_scaffold_4_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1588..2475)
DNA (888bp) protein (296aa)
amidinotransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288E816
Amidinotransferase {ECO:0000313|EMBL:EFR33723.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
amidinotransferase
71_008_scaffold_4_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2570..3397)
DNA (828bp) protein (276aa)
folD; methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
tetrahydrofolate dehydrogenase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288EF61
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_008_scaffold_4_4
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3398..4288)
DNA (891bp) protein (297aa)
Putative lipid kinase SP_1045 {ECO:0000313|EMBL:CDZ75400.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDZ75400.1};; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289A9FE
hypothetical protein; K07029
71_008_scaffold_4_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4325..5062)
DNA (738bp) protein (246aa)
3-oxoacyl-[acyl-carrier protein] reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-ketoacyl-ACP reductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028960C5
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFR33594.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_008_scaffold_4_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5193..6431)
DNA (1239bp) protein (413aa)
sodium:dicarboxylate symporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028952C6
Serine/threonine transporter family protein {ECO:0000313|EMBL:EFR33767.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
serine/threonine sodium symporter
71_008_scaffold_4_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6437..7318)
DNA (882bp) protein (294aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EFR33664.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFR33664.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L-serine dehydratase, iron-sulfur-dependent subunit alpha; K01752 L-serine dehydratase [EC:4.3.1.17]
serine dehydratase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002898756
71_008_scaffold_4_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7319..7987)
DNA (669bp) protein (223aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EFR33722.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFR33722.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
L-serine dehydratase, iron-sulfur-dependent subunit beta; K01752 L-serine dehydratase [EC:4.3.1.17]
serine dehydratase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288FD3E
71_008_scaffold_4_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8226..9797
DNA (1572bp) protein (524aa)
aminobenzoyl-glutamate transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002891397
AbgT transporter family {ECO:0000313|EMBL:EFR33661.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
AbgT transporter; K12942 aminobenzoyl-glutamate transport protein
71_008_scaffold_4_10
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9882..10580)
DNA (699bp) protein (233aa)
radical SAM protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002890EFE
Uncharacterized protein {ECO:0000313|EMBL:EEB35408.1}; TaxID=561177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus hydrogenalis DSM 7454.;"
radical SAM protein
71_008_scaffold_4_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10805..11647
DNA (843bp) protein (281aa)
6-phosphogluconate dehydratase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288FAEF
EDD domain protein, DegV family {ECO:0000313|EMBL:EFR33666.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
degV family protein
71_008_scaffold_4_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11752..12765
DNA (1014bp) protein (338aa)
membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002897493
Putative membrane protein {ECO:0000313|EMBL:EFR33632.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_008_scaffold_4_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12705..14702
DNA (1998bp) protein (666aa)
phosphoesterase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287ED69
DHHA1 domain protein {ECO:0000313|EMBL:EFR33615.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
phosphoesterase domain-containing protein
71_008_scaffold_4_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14705..15172
DNA (468bp) protein (156aa)
50S ribosomal protein L9 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289D669
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
71_008_scaffold_4_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15159..16520
DNA (1362bp) protein (454aa)
Replicative DNA helicase {ECO:0000313|EMBL:EFR33756.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR33756.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
dnaC; replicative DNA helicase DnaC (EC:3.6.1.-)
replicative DNA helicase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A02A7
71_008_scaffold_4_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16616..17500
DNA (885bp) protein (295aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
undecaprenol kinase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
UDP pyrophosphate phosphatase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D33D
71_008_scaffold_4_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17502..18296
DNA (795bp) protein (265aa)
hydrolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002890958
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EFR33626.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
N-carbamoyl-D-amino acid amidohydrolase
71_008_scaffold_4_18
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18653..20059)
DNA (1407bp) protein (469aa)
aminoacyl-histidine dipeptidase n=1 Tax=Brachyspira innocens RepID=UPI00036E280A
Xaa His dipeptidase
Xaa His dipeptidase {ECO:0000313|EMBL:AFR71688.1}; TaxID=1133568 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli B2904.;"
71_008_scaffold_4_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20062..21372)
DNA (1311bp) protein (437aa)
Purine-cytosine permease-like transporter n=1 Tax=Clostridium ultunense Esp RepID=M1ZLC9_9CLOT
Purine-cytosine permease-like transporter {ECO:0000313|EMBL:CCQ96982.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
purine-cytosine permease-like transporter
71_008_scaffold_4_20
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21434..22471)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Desulfotomaculum RepID=F0DQ95_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF93512.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
71_008_scaffold_4_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22488..22955)
DNA (468bp) protein (156aa)
transcriptional regulator n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FF62BF
Putative HTH-type transcriptional regulator Ptr2 {ECO:0000313|EMBL:EFR33628.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
transcriptional regulator
71_008_scaffold_4_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23264..24547)
DNA (1284bp) protein (428aa)
C4-dicarboxylate ABC transporter n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003116BF3
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ERI75660.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
TRAP transporter, DctM subunit
71_008_scaffold_4_23
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24535..25017)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002E554E2
TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein {ECO:0000313|EMBL:EGY76342.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
TRAP-type C4-dicarboxylate transport system, small permease component
71_008_scaffold_4_24
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(25032..26027)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002EE54F2
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EUB35419.1}; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
TRAP dicarboxylate transporter subunit DctP
71_008_scaffold_4_25
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(26029..26880)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DD52A9
Uncharacterized protein {ECO:0000313|EMBL:EUB35420.1}; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
hypothetical protein
71_008_scaffold_4_26
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

27095..28024
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00030AC150
LysR substrate-binding domain protein {ECO:0000313|EMBL:EUB35421.1}; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
Transcriptional regulator
71_008_scaffold_4_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28107..28499)
DNA (393bp) protein (131aa)
XRE family transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002885F11
Transcriptional regulator {ECO:0000313|EMBL:CEO07581.1}; Transcriptional regulator,HTH-type transcriptional regulator immR,transcriptional repressor DicA,Predicted transcriptional regulator,Helix-turn-helix domain {ECO:0000313|EMBL:CEK34169.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
XRE family transcriptional regulator
71_008_scaffold_4_28
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28702..30099
DNA (1398bp) protein (466aa)
sodium:glutamate symporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288CAE8
ESS family glutamate:Na+ symporter {ECO:0000313|EMBL:EGY79980.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
hypothetical protein; K03312 glutamate:Na+ symporter, ESS family
71_008_scaffold_4_29
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30066..31139
DNA (1074bp) protein (358aa)
2-hydroxyacid dehydrogenase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288371F
Uncharacterized protein {ECO:0000313|EMBL:EGY79981.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
putative glycerate dehydrogenase
71_008_scaffold_4_30
unknown

Not on your lists

31129..31680
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00036E7B75
Displaying items 1-30 of 255 in total

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