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71_008_scaffold_11

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Displaying items 1-30 of 168 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_11_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103..1032
DNA (930bp) protein (310aa)
heat shock protein DnaJ domain-containing protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002892C71
DnaJ domain protein {ECO:0000313|EMBL:EFR32774.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
heat shock protein; K05516 curved DNA-binding protein
71_008_scaffold_11_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1033..3615
DNA (2583bp) protein (861aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289DE25
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
clpB2; chaperone protein ClpB
71_008_scaffold_11_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3797..5569
DNA (1773bp) protein (591aa)
cellulosome anchoring protein cohesin subunit n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A0EA7
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32799.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
S-layer homology domain containing protein
71_008_scaffold_11_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5913..7868
DNA (1956bp) protein (652aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
metG; methionyl-tRNA ligase MetG (EC:6.1.1.10)
methionyl-tRNA synthetase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889A40
71_008_scaffold_11_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7877..8650
DNA (774bp) protein (258aa)
hydrolase TatD n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287C528
Hydrolase, TatD family {ECO:0000313|EMBL:EFR32793.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
deoxyribonuclease, TatD Mg-dependent
71_008_scaffold_11_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8638..9189
DNA (552bp) protein (184aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DNA-binding protein; K05985 ribonuclease M5 [EC:3.1.26.8]
DNA primase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288FEBD
71_008_scaffold_11_7
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9152..10033
DNA (882bp) protein (294aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
16S rRNA methyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002885169
ksgA; dimethyladenosine transferase KsgA
71_008_scaffold_11_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10041..10391
DNA (351bp) protein (117aa)
ArsR family transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289E952
Putative HTH-type transcriptional repressor CzrA {ECO:0000313|EMBL:EFR32811.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
HTH transcriptional regulator, ArsR family
71_008_scaffold_11_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10463..10690
DNA (228bp) protein (76aa)
glutaredoxin n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287C322
Glutaredoxin {ECO:0000313|EMBL:EFR32794.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
glutaredoxin
71_008_scaffold_11_10
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10743..11309
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FE6521
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
71_008_scaffold_11_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11873..12190
DNA (318bp) protein (106aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
sodium pump decarboxylase subunit gamma n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289AA3D
71_008_scaffold_11_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12237..12662
DNA (426bp) protein (142aa)
Glutaconyl-CoA decarboxylase subunit gamma {ECO:0000313|EMBL:EFR32742.1}; EC=4.1.1.70 {ECO:0000313|EMBL:EFR32742.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
biotin/lipoyl attachment domain-containing protein; K01615 glutaconyl-CoA decarboxylase [EC:4.1.1.70]
pyruvate carboxylase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287BD0A
71_008_scaffold_11_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12678..13814
DNA (1137bp) protein (379aa)
Glutaconyl-CoA decarboxylase subunit beta {ECO:0000313|EMBL:EFR32746.1}; EC=4.1.1.70 {ECO:0000313|EMBL:EFR32746.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.70 4.1.1.3)
glutaconyl-CoA decarboxylase subunit beta n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A3B2D
71_008_scaffold_11_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13897..14856
DNA (960bp) protein (320aa)
Glutaconate CoA-transferase subunit A {ECO:0000313|EMBL:EFR32758.1}; EC=2.8.3.12 {ECO:0000313|EMBL:EFR32758.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
glutaconate CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
glutaconate CoA-transferase subunit A n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002891F8F
71_008_scaffold_11_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14856..15653
DNA (798bp) protein (266aa)
Glutaconate CoA-transferase subunit B {ECO:0000313|EMBL:EFR32813.1}; EC=2.8.3.12 {ECO:0000313|EMBL:EFR32813.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
glutaconate CoA transferase subunit B; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
glutaconate CoA-transferase subunit B n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888292
71_008_scaffold_11_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15665..17434
DNA (1770bp) protein (590aa)
Glutaconyl-CoA decarboxylase subunit alpha {ECO:0000313|EMBL:EFR32705.1}; EC=4.1.1.70 {ECO:0000313|EMBL:EFR32705.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
carboxyl transferase; K01615 glutaconyl-CoA decarboxylase [EC:4.1.1.70]
glutaconyl-CoA decarboxylase subunit alpha n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288A6F8
71_008_scaffold_11_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17674..18492
DNA (819bp) protein (273aa)
2-hydroxyglutaryl-CoA dehydratase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287F708
(R)-2-hydroxyglutaryl-CoA dehydratase activator {ECO:0000313|EMBL:EFR32767.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
(R)-2-hydroxyglutaryl-CoA dehydratase activator
71_008_scaffold_11_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18513..19835
DNA (1323bp) protein (441aa)
2-hydroxyglutaryl-CoA dehydratase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289E6E5
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:EFR32795.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
R-phenyllactate dehydratase, medium subunit
71_008_scaffold_11_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19848..21011
DNA (1164bp) protein (388aa)
2-hydroxyglutaryl-CoA dehydratase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288FC2B
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:EFR32723.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
(R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit
71_008_scaffold_11_20
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21176..22504
DNA (1329bp) protein (443aa)
ATPase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C3B1
ATPase {ECO:0000313|EMBL:KGF10465.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus sp. MV1.;"
Predicted ATPase (AAA+ superfamily)
71_008_scaffold_11_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22543..23154)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288CAB4
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32673.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_008_scaffold_11_22
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23556..24851
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288D050
Uncharacterized protein {ECO:0000313|EMBL:KGF29464.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
hypothetical protein
71_008_scaffold_11_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25009..25527
DNA (519bp) protein (173aa)
ogt1; methylated-DNA--protein-cysteine methyltransferase 1 (EC:2.1.1.63); K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA-[]-cysteine S-methyltransferase family protein {ECO:0000313|EMBL:EQE69461.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EQE69461.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
6-O-methylguanine-DNA methyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287D249
71_008_scaffold_11_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25651..25932
DNA (282bp) protein (94aa)
co-chaperonin GroES n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002899B9C
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
groES; 10 kDa co-chaperonin
71_008_scaffold_11_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25944..27566
DNA (1623bp) protein (541aa)
molecular chaperone GroEL n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002882088
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
heat shock protein; K04077 chaperonin GroEL
71_008_scaffold_11_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28027..28716
DNA (690bp) protein (230aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
hydroxyacylglutathione hydrolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002881B05
71_008_scaffold_11_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28788..30128)
DNA (1341bp) protein (447aa)
sodium-dependent tryptophan transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289DFFC
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_008_scaffold_11_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30251..31894)
DNA (1644bp) protein (548aa)
Tryptophan 2,3-dioxygenase {ECO:0000313|EMBL:EFR32570.1}; EC=4.1.99.1 {ECO:0000313|EMBL:EFR32570.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
tryptophanase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002884B2D
hypothetical protein
71_008_scaffold_11_29
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32258..33148)
DNA (891bp) protein (297aa)
Fructose-bisphosphate aldolase class 1 {ECO:0000313|EMBL:EFR32561.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EFR32561.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
fructose-bisphosphate aldolase, class I; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
fructose-bisphosphate aldolase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289B2E9
71_008_scaffold_11_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33238..33849
DNA (612bp) protein (204aa)
Ribonuclease HI {ECO:0000313|EMBL:EFR32548.1}; EC=3.1.26.4 {ECO:0000313|EMBL:EFR32548.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rnhA; ribonuclease HI; K03469 ribonuclease HI [EC:3.1.26.4]
RNase H n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028857AE
Displaying items 1-30 of 168 in total

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