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71_008_scaffold_30

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Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_30_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

239..1375
DNA (1137bp) protein (379aa)
antiporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288493F
AspT/YidE/YbjL antiporter duplication domain protein {ECO:0000313|EMBL:EFR33846.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Predicted permease
71_008_scaffold_30_2
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2145..3164)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028821AB
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EFP61348.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
71_008_scaffold_30_3
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3270..4154)
DNA (885bp) protein (295aa)
binding-protein-dependent transport system inner membrane protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888717
ABC transporter, permease protein {ECO:0000313|EMBL:EFP61345.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
ABC-type phosphate/phosphonate transport system, permease component
71_008_scaffold_30_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4148..4933)
DNA (786bp) protein (262aa)
phosphonate ABC transporter permease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002884EBA
Phosphonate ABC transporter, permease PhnE {ECO:0000313|EMBL:ENY86159.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
transporter; K02042 phosphonate transport system permease protein
71_008_scaffold_30_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4965..5732)
DNA (768bp) protein (256aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphonate ABC transporter ATP-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289BD81
phosphonate ABC transporter, ATP-binding protein
71_008_scaffold_30_6
Bacillus alcalophilus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5793..6584)
DNA (792bp) protein (264aa)
putative phosphoesterase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287A688
Phosphoesterase {ECO:0000313|EMBL:KGA99031.1}; TaxID=1218173 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus alcalophilus ATCC 27647.;"
putative phosphoesterase; K07053
71_008_scaffold_30_7
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6590..7354)
DNA (765bp) protein (255aa)
ABC transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889A66
phnL; phosphonates transport ATP-binding protein PhnL; K05780 putative phosphonate transport system ATP-binding protein
Phosphonates transport ATP-binding protein PhnL {ECO:0000313|EMBL:AEB29215.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_8
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7356..7988)
DNA (633bp) protein (211aa)
putative antibiotic acetyltransferase, isoleucine patch superfamily; K00680 [EC:2.3.1.-]
chloramphenicol acetyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A1B27
Putative antibiotic acetyltransferase, isoleucine patch superfamily {ECO:0000313|EMBL:AEB29214.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_9
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7981..9168)
DNA (1188bp) protein (396aa)
phosphonate metabolism protein PhnM n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289780D
phnM; protein PhnM; K06162 PhnM protein
Protein PhnM {ECO:0000313|EMBL:AEB29213.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9162..10016)
DNA (855bp) protein (285aa)
phosphonate C-P lyase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289C8F8
ABC-type phosphonate transport system, ATPase component
ABC-type phosphonate transport system, ATPase component {ECO:0000313|EMBL:AGK98326.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
71_008_scaffold_30_11
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10029..10874)
DNA (846bp) protein (282aa)
carbon-phosphorus lyase complex subunit PhnJ n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002895627
phnJ; protein PhnJ; K06163 PhnJ protein
Protein PhnJ {ECO:0000313|EMBL:AEB29211.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_12
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10864..11952)
DNA (1089bp) protein (363aa)
carbon-phosphorus lyase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028980C5
phnI; putative phosphonate metabolism protein; K06164 PhnI protein
Putative phosphonate metabolism protein {ECO:0000313|EMBL:AEB29210.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_13
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11933..12523)
DNA (591bp) protein (197aa)
phosphonate metabolism protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288ADF9
phosphonate metabolism protein; K06165 PhnH protein
Phosphonate metabolism protein {ECO:0000313|EMBL:AEB29209.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_14
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12533..12955)
DNA (423bp) protein (141aa)
putative phosphonate metabolism protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289C242
phnG; putative phosphonate metabolism protein; K06166 PhnG protein
Putative phosphonate metabolism protein {ECO:0000313|EMBL:AEB29208.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_15
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13023..13790)
DNA (768bp) protein (256aa)
transcriptional regulatory protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287F90E
transcriptional regulatory protein; K03710 GntR family transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:AEB29207.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-4).;"
71_008_scaffold_30_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14155..14538)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889C49
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K02935 large subunit ribosomal protein L7/L12
71_008_scaffold_30_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14584..15174)
DNA (591bp) protein (197aa)
50S ribosomal protein L10 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289572D
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
71_008_scaffold_30_18
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15491..16045
DNA (555bp) protein (185aa)
proton-coupled thiamine transporter YuaJ n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002895E24
proton-coupled thiamine transporter YuaJ
Proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:ACV28218.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
71_008_scaffold_30_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16135..16836)
DNA (702bp) protein (234aa)
50S ribosomal protein L1 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287E9DD
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
71_008_scaffold_30_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16876..17301)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A2972
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
71_008_scaffold_30_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17349..17891)
DNA (543bp) protein (181aa)
antitermination factor NusG n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002892270
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nusG; NusG antitermination factor; K02601 transcriptional antiterminator NusG
71_008_scaffold_30_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17843..18121)
DNA (279bp) protein (93aa)
preprotein translocase subunit SecE n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888961
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
71_008_scaffold_30_23
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18131..18316)
DNA (186bp) protein (62aa)
50S ribosomal protein L33 n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D2X0_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
71_008_scaffold_30_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18476..19357)
DNA (882bp) protein (294aa)
CAAX amino terminal protease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002887E98
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFR33172.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_008_scaffold_30_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19390..21687)
DNA (2298bp) protein (766aa)
DEAD/DEAH box helicase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002898E12
DEAD2 domain protein {ECO:0000313|EMBL:EFR33249.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DEAD/DEAH box helicase
71_008_scaffold_30_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21737..22201)
DNA (465bp) protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
tRNA methyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289B2DD
71_008_scaffold_30_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22195..23751)
DNA (1557bp) protein (519aa)
FAD dependent oxidoreductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288917E
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFR33223.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
FAD dependent oxidoreductase; K07137
71_008_scaffold_30_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23824..24366
DNA (543bp) protein (181aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
lepB; signal peptidase I (EC:3.4.21.89)
signal peptidase I n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002882ECF
71_008_scaffold_30_29
unknown

Not on your lists

24368..24688
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002893EE3
71_008_scaffold_30_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24712..25938)
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
histidine kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889BA8
histidine kinase
Displaying items 1-30 of 117 in total

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