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71_008_scaffold_219

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_219_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..106
DNA (105bp) protein (35aa)
peptidoglycan-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289A64E
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33394.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_008_scaffold_219_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

187..1056
DNA (870bp) protein (290aa)
copper amine oxidase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A2A72
Copper amine oxidase N-terminal domain protein {ECO:0000313|EMBL:EFR33364.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
copper amine oxidase-like domain-containing protein
71_008_scaffold_219_3
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1164..1886)
DNA (723bp) protein (241aa)
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
amino acid ABC transporter ATP-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287B270
ABC transporter related {ECO:0000313|EMBL:ADL69651.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM; 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum).;"
71_008_scaffold_219_4
Staphylococcus simiae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1861..2670)
DNA (810bp) protein (270aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002897DE4
Amino acid ABC transporter, permease {ECO:0000313|EMBL:EHJ09084.1}; TaxID=911238 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simiae CCM 7213.;"
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein; K02029 polar amino acid transport system permease protein; K02030 polar amino acid transport system substrate-binding protein
71_008_scaffold_219_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2679..3485)
DNA (807bp) protein (269aa)
polar amino acid ABC transporter amino acid-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028960D6
Amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:EOD01333.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
polar amino acid ABC transporter amino acid-binding protein; K02030 polar amino acid transport system substrate-binding protein
71_008_scaffold_219_6
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4171..5391
DNA (1221bp) protein (407aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5]
argininosuccinate synthase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289A81C
71_008_scaffold_219_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5393..6763
DNA (1371bp) protein (457aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
argininosuccinate lyase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002885961
71_008_scaffold_219_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6999..7277
DNA (279bp) protein (93aa)
transcriptional regulator n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A2E94
Transcriptional repressor PagR {ECO:0000313|EMBL:EFR33336.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ArsR family transcriptional regulator
71_008_scaffold_219_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7295..10228
DNA (2934bp) protein (978aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DNA helicase UvrD n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A0D73
putative ATP-dependent exonuclease
71_008_scaffold_219_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10243..11589
DNA (1347bp) protein (449aa)
Butyryl-CoA:acetate CoA-transferase {ECO:0000313|EMBL:EFR33353.1}; EC=2.8.3.- {ECO:0000313|EMBL:EFR33353.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
4-hydroxybutyrate CoA-transferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287E4C8
Acetyl-CoA hydrolase
71_008_scaffold_219_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11650..12888)
DNA (1239bp) protein (413aa)
carboxylate-amine ligase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028924C0
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32882.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
ATP-grasp enzyme
71_008_scaffold_219_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12969..13931)
DNA (963bp) protein (321aa)
oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002886C5C
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EFR32947.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K07139
71_008_scaffold_219_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14030..14947
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288D1B5
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR32926.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
TPR repeat-containing protein
71_008_scaffold_219_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14917..15435
DNA (519bp) protein (173aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
map2; hypothetical protein (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
methionine aminopeptidase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002897C74
71_008_scaffold_219_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15436..15672
DNA (237bp) protein (79aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
methionine aminopeptidase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002897C74
71_008_scaffold_219_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15893..16498
DNA (606bp) protein (202aa)
peptidyl-prolyl cis-trans isomerase; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
peptidyl-prolyl cis-trans isomerase, partial n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288515D
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EFR32880.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
71_008_scaffold_219_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16507..17109
DNA (603bp) protein (201aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21]
thymidine kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A1767
71_008_scaffold_219_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17170..18240
DNA (1071bp) protein (357aa)
carbohydrate kinase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289AFD6
HTH domain protein {ECO:0000313|EMBL:EFR32861.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
sugar kinase
71_008_scaffold_219_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18233..19153
DNA (921bp) protein (307aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
pseudouridine-5''''-phosphate glycosidase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002894820
Indigoidine synthase A family protein
71_008_scaffold_219_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19134..19637
DNA (504bp) protein (168aa)
thioesterase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000304C7C9
Thioesterase family protein {ECO:0000313|EMBL:EFR32928.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
acyl-CoA thioester hydrolase
71_008_scaffold_219_21
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19683..20462)
DNA (780bp) protein (260aa)
ABC transporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888A35
Oligopeptide ABC transporter, ATP-binding protein AppF {ECO:0000313|EMBL:EGC82830.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
ABC transporter-like protein
71_008_scaffold_219_22
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20419..21429)
DNA (1011bp) protein (337aa)
peptide ABC transporter ATPase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288922B
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACV28439.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
71_008_scaffold_219_23
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21414..22241)
DNA (828bp) protein (276aa)
ABC transporter permease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028869A7
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACV28438.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
71_008_scaffold_219_24
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22243..23184)
DNA (942bp) protein (314aa)
ABC transporter permease n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000315C7CF
Putative glutathione ABC transporter, permease protein GsiC {ECO:0000313|EMBL:EGC82785.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
71_008_scaffold_219_25
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23177..24697)
DNA (1521bp) protein (507aa)
ABC transporter substrate-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288B697
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EGC82838.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
71_008_scaffold_219_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24881..25162
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288C1CB
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32954.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
71_008_scaffold_219_27
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25174..25818
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nth; endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
endonuclease III n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002890001
71_008_scaffold_219_28
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25823..27205
DNA (1383bp) protein (461aa)
vancomycin resistance protein W n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287B30D
VanW-like protein {ECO:0000313|EMBL:EFR32899.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
von Willebrand factor A
71_008_scaffold_219_29
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27272..27844
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002896EAC
Uncharacterized protein {ECO:0000313|EMBL:EFA90026.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315-B.;"
71_008_scaffold_219_30
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27835..28662
DNA (828bp) protein (276aa)
RNA-binding protein n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287F195
S1 RNA binding domain protein {ECO:0000313|EMBL:EFR32898.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
RNA-binding protein; K00243 hypothetical protein
Displaying items 1-30 of 31 in total

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