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71_008_scaffold_113

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_113_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..1497
DNA (1497bp) protein (499aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:ESV20182.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ESV20182.1};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Succinate dehydrogenase, flavoprotein subunit n=30 Tax=Staphylococcus epidermidis RepID=Q5HQ26_STAEQ
71_008_scaffold_113_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1497..2339
DNA (843bp) protein (281aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:ESV20183.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ESV20183.1};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Succinate dehydrogenase, iron-sulfur protein n=27 Tax=Staphylococcus epidermidis RepID=Q5HQ25_STAEQ
71_008_scaffold_113_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2502..3305
DNA (804bp) protein (268aa)
murI; glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase {ECO:0000255|HAMAP-Rule:MF_00258}; EC=5.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00258};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Glutamate racemase n=24 Tax=Staphylococcus epidermidis RepID=MURI_STAEQ
71_008_scaffold_113_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3320..3907
DNA (588bp) protein (196aa)
nucleoside-triphosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococc
Non-canonical purine NTP pyrophosphatase n=12 Tax=Staphylococcus epidermidis RepID=NTPA_STAEQ
71_008_scaffold_113_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3900..4409
DNA (510bp) protein (170aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Phosphodiesterase family protein n=16 Tax=Staphylococcus epidermidis RepID=H0DXT8_STAEP
phosphoesterase; K07095
71_008_scaffold_113_trna_1
unknown

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comp(4648..4721)
DNA (74bp)
transferRNA Arg
71_008_scaffold_113_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5073..5204
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis (strain ATCC 12228) RepID=Q8CSY3_STAES
phenol soluble modulin beta 1
Uncharacterized protein {ECO:0000313|EMBL:EES36415.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5260..5394
DNA (135bp) protein (45aa)
Phenol soluble modulin beta 1 n=33 Tax=Staphylococcus epidermidis RepID=Q5HQ20_STAEQ
phenol soluble modulin beta 1
Uncharacterized protein {ECO:0000313|EMBL:EES36416.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5446..5580
DNA (135bp) protein (45aa)
Phenol soluble modulin beta 1 n=85 Tax=Staphylococcus epidermidis RepID=Q5HQ19_STAEQ
phenol soluble modulin beta 1
Antibacterial protein 3 {ECO:0000313|EMBL:EES36401.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5687..6373
DNA (687bp) protein (229aa)
Hydrolase, haloacid dehalogenase-like family n=24 Tax=Staphylococcus epidermidis RepID=Q5HQ17_STAEQ
HAD superfamily hydrolase
HAD hydrolase, TIGR02254 family {ECO:0000313|EMBL:EES36402.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6480..6920)
DNA (441bp) protein (147aa)
Uncharacterized N-acetyltransferase HMPREF0791_0983 {ECO:0000256|HAMAP-Rule:MF_00824}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00824};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Uncharacterized N-acetyltransferase HMPREF0791_0983 n=5 Tax=Staphylococcus epidermidis RepID=C5QWE0_STAEP
hypothetical protein
71_008_scaffold_113_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7103..8716
DNA (1614bp) protein (538aa)
Putative cysteine ligase BshC {ECO:0000255|HAMAP-Rule:MF_01867}; EC=6.-.-.- {ECO:0000255|HAMAP-Rule:MF_01867};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
UPF0747 protein SERP0742 n=7 Tax=Staphylococcus epidermidis RepID=Y742_STAEQ
hypothetical protein
71_008_scaffold_113_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8860..9291
DNA (432bp) protein (144aa)
Protein MraZ n=78 Tax=Staphylococcus epidermidis RepID=MRAZ_STAEQ
cell division protein MraZ; K03925 MraZ protein
Transcriptional regulator MraZ; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_113_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9306..10241
DNA (936bp) protein (312aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Ribosomal RNA small subunit methyltransferase H n=14 Tax=Staphylococcus epidermidis RepID=RSMH_STAEQ
71_008_scaffold_113_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10254..10655
DNA (402bp) protein (134aa)
Cell division protein FtsL n=59 Tax=Staphylococcus epidermidis RepID=Q5HQ12_STAEQ
ftsL; cell division protein FtsL
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10636..12963
DNA (2328bp) protein (776aa)
pbp1; penicillin-binding protein 1; K12552 penicillin-binding protein 1 [EC:3.4.-.-]
Penicillin-binding protein 1 n=6 Tax=Staphylococcus epidermidis RepID=Q5HQ11_STAEQ
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EES36349.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13152..14117
DNA (966bp) protein (322aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00038}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=31 Tax=Staphylococcus epidermidis RepID=MRAY_STAEQ
71_008_scaffold_113_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14119..15468
DNA (1350bp) protein (450aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|RuleBase:RU003664};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=22 Tax=Staphylococcus epidermidis RepID=MURD_STAEQ
71_008_scaffold_113_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15478..16875
DNA (1398bp) protein (466aa)
Cell division protein DivIB n=7 Tax=Staphylococcus epidermidis RepID=Q5HQ08_STAEQ
Cell division protein DivIB {ECO:0000256|HAMAP-Rule:MF_00912}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
cell division protein FtsQ; K03589 cell division protein FtsQ
71_008_scaffold_113_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16981..18375
DNA (1395bp) protein (465aa)
Cell division protein FtsA n=8 Tax=Staphylococcus epidermidis RepID=FTSA_STAEQ
ftsA; cell division protein FtsA; K03590 cell division protein FtsA
Cell division protein FtsA {ECO:0000255|HAMAP-Rule:MF_02033}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_113_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18408..19592
DNA (1185bp) protein (395aa)
Cell division protein FtsZ n=27 Tax=Staphylococcus epidermidis RepID=FTSZ_STAEQ
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20008..20799
DNA (792bp) protein (264aa)
Laccase domain protein SERP0752 n=13 Tax=Staphylococcus epidermidis RepID=Y752_STAEQ
hypothetical protein; K05810 conserved hypothetical protein
Laccase domain protein SERP0752; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_113_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20825..21493
DNA (669bp) protein (223aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=Q5HQ04_STAEQ
hypothetical protein; K06997
Uncharacterized protein {ECO:0000313|EMBL:AAW54141.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_113_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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21507..22100
DNA (594bp) protein (198aa)
Cell division protein SepF n=29 Tax=Staphylococcus epidermidis RepID=SEPF_STAEQ
ylmF; hypothetical protein; K09772 cell division inhibitor SepF
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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22112..22402
DNA (291bp) protein (97aa)
YlmG protein n=78 Tax=Staphylococcus epidermidis RepID=Q5HQ02_STAEQ
ylmG; hypothetical protein; K02221 YggT family protein
YlmG protein {ECO:0000313|EMBL:AAW54143.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_113_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22658..23320
DNA (663bp) protein (221aa)
YlmH protein n=14 Tax=Staphylococcus epidermidis RepID=Q5HQ01_STAEQ
ylmH; hypothetical protein
YlmH protein {ECO:0000313|EMBL:AAW54151.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_113_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23343..23999
DNA (657bp) protein (219aa)
Cell-division initiation protein, putative n=10 Tax=Staphylococcus epidermidis RepID=Q5HQ00_STAEQ
cell-division initiation protein; K04074 cell division initiation protein
DivIVA domain protein {ECO:0000313|EMBL:EES36360.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_113_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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24313..27063
DNA (2751bp) protein (917aa)
Isoleucine--tRNA ligase; EC=6.1.1.5;; Isoleucyl-tRNA synthetase; Short=IleRS;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=7 Tax=Staphylococcus epidermidis RepID=SYI_STAEQ
71_008_scaffold_113_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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27833..28630
DNA (798bp) protein (266aa)
Glyoxalase family protein n=28 Tax=Staphylococcus epidermidis RepID=Q5HPZ7_STAEQ
glyoxalase; K07104
Glyoxalase {ECO:0000313|EMBL:ESV19222.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_008_scaffold_113_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28635..29105
DNA (471bp) protein (157aa)
LysM domain protein n=16 Tax=Staphylococcus epidermidis RepID=Q5HPZ6_STAEQ
LysM domain-containing protein
Peptidase M23B {ECO:0000313|EMBL:ESV19223.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Displaying items 1-30 of 51 in total

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