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71_008_scaffold_154

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_154_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..784
DNA (783bp) protein (261aa)
sun; sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Sun protein n=8 Tax=Staphylococcus epidermidis RepID=Q5HPX4_STAEQ
71_008_scaffold_154_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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787..1881
DNA (1095bp) protein (365aa)
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
Probable dual-specificity RNA methyltransferase RlmN n=13 Tax=Staphylococcus epidermidis RepID=RLMN_STAEQ
71_008_scaffold_154_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1888..2631
DNA (744bp) protein (248aa)
protein phosphatase 2C; K01090 protein phosphatase [EC:3.1.3.16]
Protein phosphatase 2C {ECO:0000313|EMBL:EES36387.1}; EC=3.1.3.16 {ECO:0000313|EMBL:EES36387.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Protein phosphatase 2C domain protein n=27 Tax=Staphylococcus epidermidis RepID=Q5HPX2_STAEQ
71_008_scaffold_154_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2628..4628
DNA (2001bp) protein (667aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Kinase domain protein n=2 Tax=Staphylococcus epidermidis RepID=H3V2T9_STAEP
Serine/threonine protein kinase, putative {ECO:0000313|EMBL:AAW54204.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_154_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4922..5812
DNA (891bp) protein (297aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Staphylococcus epidermidis RepID=C5QWI6_STAEP
71_008_scaffold_154_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5813..6457
DNA (645bp) protein (215aa)
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Ribulose-phosphate 3-epimerase n=26 Tax=Staphylococcus epidermidis RepID=Q5HPW9_STAEQ
71_008_scaffold_154_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6462..7097
DNA (636bp) protein (212aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=Q5HPW8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54215.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_154_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(7181..7369)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=81 Tax=Staphylococcus epidermidis RepID=RL28_STAEQ
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
71_008_scaffold_154_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7727..8101
DNA (375bp) protein (125aa)
Uncharacterized protein n=74 Tax=Staphylococcus epidermidis RepID=Q5HPW6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV19253.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_008_scaffold_154_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8116..9774
DNA (1659bp) protein (553aa)
Uncharacterized protein SERP0792 n=21 Tax=Staphylococcus epidermidis RepID=Y792_STAEQ
Uncharacterized protein {ECO:0000313|EMBL:ESV19254.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
DAK2 domain-containing protein; K07030
71_008_scaffold_154_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9978..12026
DNA (2049bp) protein (683aa)
ATP-dependent DNA helicase RecG; EC=3.6.4.12;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=8 Tax=Staphylococcus epidermidis RepID=RECG_STAEQ
71_008_scaffold_154_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12136..12747
DNA (612bp) protein (204aa)
DeoR family transcriptional regulator n=16 Tax=Staphylococcus epidermidis RepID=V4QIX5_STAEP
fatty acid biosynthesis transcriptional regulator
Putative transcription factor FapR {ECO:0000313|EMBL:EES36396.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_154_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12749..13726
DNA (978bp) protein (326aa)
plsX; glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis
Phosphate acyltransferase n=27 Tax=Staphylococcus epidermidis RepID=PLSX_STAEQ
71_008_scaffold_154_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13728..14657
DNA (930bp) protein (310aa)
fabD; malonyl CoA-ACP transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Malonyl CoA-acyl carrier protein transacylase n=6 Tax=Staphylococcus epidermidis RepID=Q5HPW1_STAEQ
71_008_scaffold_154_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14650..15384
DNA (735bp) protein (245aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier-protein] reductase FabG; EC=1.1.1.100;; 3-ketoacyl-acyl carrier protein reductase; Beta-Ketoacyl-acyl carrier protein reductase; Beta-ketoacyl-ACP reductase; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
3-oxoacyl-[acyl-carrier-protein] reductase FabG n=73 Tax=Staphylococcus epidermidis RepID=FABG_STAEQ
71_008_scaffold_154_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15610..15843
DNA (234bp) protein (78aa)
Acyl carrier protein n=99 Tax=Staphylococcus RepID=ACP_STAEQ
acpP; acyl carrier protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=904802 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CO-98.;"
71_008_scaffold_154_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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15958..16695
DNA (738bp) protein (246aa)
rnc; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 {ECO:0000255|HAMAP-Rule:MF_00104}; EC=3.1.26.3 {ECO:0000255|HAMAP-Rule:MF_00104};; Ribonuclease III {ECO:0000255|HAMAP-Rule:MF_00104}; Short=RNase III {ECO:0000255|HAMAP-Rule:MF_00104};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Ribonuclease 3 n=27 Tax=Staphylococcus epidermidis RepID=RNC_STAEQ
71_008_scaffold_154_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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16822..20391
DNA (3570bp) protein (1190aa)
Chromosome partition protein Smc n=6 Tax=Staphylococcus epidermidis RepID=Q5HPV7_STAEQ
chromosome segregation SMC protein; K03529 chromosome segregation protein
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_154_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20388..21614
DNA (1227bp) protein (409aa)
Signal recognition particle receptor FtsY n=6 Tax=Staphylococcus epidermidis RepID=Q5HPV6_STAEQ
ftsY; cell division protein FtsY; K03110 fused signal recognition particle receptor
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_154_20
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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21616..21948
DNA (333bp) protein (111aa)
UPF0122 protein SERP0802 n=53 Tax=Staphylococcus epidermidis RepID=Y802_STAEQ
DNA-binding protein; K09787 hypothetical protein
UPF0122 protein Q614_SASC00234G0008 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
71_008_scaffold_154_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


21979..23346
DNA (1368bp) protein (456aa)
Signal recognition particle protein n=13 Tax=Staphylococcus epidermidis RepID=Q5HPV4_STAEQ
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_154_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


23653..23928
DNA (276bp) protein (92aa)
30S ribosomal protein S16 n=83 Tax=Staphylococcus RepID=RS16_STAEQ
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_154_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24055..24558
DNA (504bp) protein (168aa)
Ribosome maturation factor RimM n=2 Tax=Staphylococcus epidermidis RepID=H3V8X8_STAEP
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_154_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24558..25295
DNA (738bp) protein (246aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA (guanine-N(1)-)-methyltransferase; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
tRNA (guanine-N(1)-)-methyltransferase n=7 Tax=Staphylococcus epidermidis RepID=E6JKY9_STAEP
71_008_scaffold_154_25
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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25401..25751
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=85 Tax=Staphylococcus RepID=RL19_STAEQ
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
71_008_scaffold_154_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25930..28533)
DNA (2604bp) protein (868aa)
Bacterial membrane protein YfhO n=1 Tax=Staphylococcus epidermidis 14.1.R1.SE RepID=H0DY49_STAEP
Membrane protein {ECO:0000313|EMBL:ESV19270.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_008_scaffold_154_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28526..31126)
DNA (2601bp) protein (867aa)
Bacterial membrane protein YfhO n=3 Tax=Staphylococcus epidermidis RepID=H0DY50_STAEP
Membrane protein {ECO:0000313|EMBL:ESV19271.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_008_scaffold_154_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31454..32317
DNA (864bp) protein (288aa)
Ribosome biogenesis GTPase A n=16 Tax=Staphylococcus epidermidis RepID=E6JKY5_STAEP
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
rbgA; ribosomal biogenesis GTPase; K14540 ribosome biogenesis GTPase A
71_008_scaffold_154_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32322..33092
DNA (771bp) protein (257aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII n=1 Tax=Staphylococcus epidermidis 14.1.R1.SE RepID=H0DUH9_STAEP
71_008_scaffold_154_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33200..34366
DNA (1167bp) protein (389aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; Short=SCS-beta {ECO:0000255|HAMAP-Rule:MF_00558};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=62 Tax=Staphylococcus epidermidis RepID=SUCC_STAEQ
Displaying items 1-30 of 35 in total

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