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71_008_scaffold_242

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_242_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

168..1193
DNA (1026bp) protein (342aa)
Alkanal monooxygenase n=13 Tax=Staphylococcus epidermidis RepID=V4Q4T3_STAEP
Alkanal monooxygenase {ECO:0000313|EMBL:ESV20542.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
alkanal monooxygenase subunit alpha
71_008_scaffold_242_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1261..2127)
DNA (867bp) protein (289aa)
Uncharacterized protein n=15 Tax=Staphylococcus epidermidis RepID=E6JNC1_STAEP
Alpha/beta hydrolase {ECO:0000313|EMBL:ESV20541.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_008_scaffold_242_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2365..3777)
DNA (1413bp) protein (471aa)
6-phospho-beta-galactosidase {ECO:0000256|HAMAP-Rule:MF_01574, ECO:0000256|RuleBase:RU004469}; EC=3.2.1.85 {ECO:0000256|HAMAP-Rule:MF_01574};; Beta-D-phosphogalactoside galactohydrolase {ECO:0000256|HAMAP-Rule:MF_01574}; P-beta-Gal {ECO:0000256|HAMAP-Rule:MF_01574}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lacG; 6-phospho-beta-galactosidase (EC:3.2.1.85); K01220 6-phospho-beta-galactosidase [EC:3.2.1.85]
6-phospho-beta-galactosidase n=20 Tax=Staphylococcus epidermidis RepID=C5R0S0_STAEP
71_008_scaffold_242_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3793..5541)
DNA (1749bp) protein (583aa)
PTS system, lactose-specific IIC component {ECO:0000313|EMBL:EES34933.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EES34933.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lactose-specificiibc component; K02787 PTS system, lactose-specific IIB component [EC:2.7.1.69]; K02788 PTS system, lactose-specific IIC component
PTS system, lactose-specific IIC component n=3 Tax=Staphylococcus epidermidis RepID=C5R0R9_STAEP
71_008_scaffold_242_5

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comp(5529..5861)
DNA (333bp) protein (111aa)
PTS system lactose-specific transporter subunit IIA; K02786 PTS system, lactose-specific IIA component [EC:2.7.1.69]
Lactose-specific phosphotransferase enzyme IIA component n=77 Tax=Staphylococcus epidermidis RepID=PTLA_STAEQ
Lactose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:ETJ21650.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
71_008_scaffold_242_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5881..6858)
DNA (978bp) protein (326aa)
Tagatose 1,6-diphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_00734};; D-tagatose-1,6-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
lacD; tagatose 1,6-diphosphate aldolase (EC:4.1.2.40); K01635 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
Tagatose 1,6-diphosphate aldolase n=21 Tax=Staphylococcus epidermidis RepID=C5R0R7_STAEP
71_008_scaffold_242_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6862..7794)
DNA (933bp) protein (311aa)
Tagatose-6-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_01557, ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|HAMAP-Rule:MF_01557, ECO:0000256|PIRNR:PIRNR000535};; Phosphotagatokinase {ECO:0000256|HAMAP-Rule:MF_01557}; Tagatose-6-phosphate kinase; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lacC; tagatose-6-phosphate kinase (EC:2.7.1.144); K00917 tagatose 6-phosphate kinase [EC:2.7.1.144]
Tagatose-6-phosphate kinase n=1 Tax=Staphylococcus epidermidis VCU128 RepID=H3WMV2_STAEP
71_008_scaffold_242_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7807..8322)
DNA (516bp) protein (172aa)
Galactose-6-phosphate isomerase subunit LacB {ECO:0000256|HAMAP-Rule:MF_01556}; EC=5.3.1.26 {ECO:0000256|HAMAP-Rule:MF_01556};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
galactose-6-phosphate isomerase subunit LacB (EC:5.3.1.26); K01819 galactose-6-phosphate isomerase [EC:5.3.1.26]
Galactose-6-phosphate isomerase, LacB subunit n=28 Tax=Staphylococcus epidermidis RepID=C5R0R5_STAEP
71_008_scaffold_242_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8337..8765)
DNA (429bp) protein (143aa)
Galactose-6-phosphate isomerase subunit LacA {ECO:0000256|HAMAP-Rule:MF_01555}; EC=5.3.1.26 {ECO:0000256|HAMAP-Rule:MF_01555};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
lacA; galactose-6-phosphate isomerase subunit LacA (EC:5.3.1.26); K01819 galactose-6-phosphate isomerase [EC:5.3.1.26]
Galactose-6-phosphate isomerase subunit lacA n=34 Tax=Staphylococcus epidermidis RepID=C5R0R4_STAEP
71_008_scaffold_242_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9119..9874)
DNA (756bp) protein (252aa)
Lactose phosphotransferase system repressor n=10 Tax=Staphylococcus epidermidis RepID=E6JNC9_STAEP
DeoR family transcriptional regulator {ECO:0000313|EMBL:ESV20533.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
lacR; lactose phosphotransferase system repressor; K02530 DeoR family transcriptional regulator, lactose phosphotransferase system repressor
71_008_scaffold_242_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10172..10912
DNA (741bp) protein (247aa)
NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NAD-dependent protein deacetylase n=4 Tax=Staphylococcus epidermidis RepID=H0DSN0_STAEP
71_008_scaffold_242_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(11174..11566)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=81 Tax=Staphylococcus epidermidis RepID=RS9_STAEQ
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
71_008_scaffold_242_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(11586..12023)
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=43 Tax=Staphylococcus epidermidis RepID=RL13_STAES
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
71_008_scaffold_242_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12283..13086)
DNA (804bp) protein (268aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=4 Tax=Staphylococcus epidermidis RepID=H0DSN3_STAEP
71_008_scaffold_242_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13090..13896)
DNA (807bp) protein (269aa)
Energy-coupling factor transporter transmembrane protein EcfT n=7 Tax=Staphylococcus epidermidis RepID=H0DSN4_STAEP
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
cobalt transport family protein; K02008 cobalt/nickel transport system permease protein
71_008_scaffold_242_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13886..14590)
DNA (705bp) protein (235aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
ABC transporter, ATP-binding protein n=10 Tax=Staphylococcus epidermidis RepID=C5R0Q7_STAEP
cbiO; cobalt transporter ATP-binding subunit; K02006 cobalt/nickel transport system ATP-binding protein
71_008_scaffold_242_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14662..15588)
DNA (927bp) protein (309aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
ABC transporter, ATP-binding protein n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5R0Q6_STAEP
cbiO; cobalt transporter ATP-binding subunit; K02006 cobalt/nickel transport system ATP-binding protein
71_008_scaffold_242_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(15883..16251)
DNA (369bp) protein (123aa)
50S ribosomal protein L17 n=8 Tax=Staphylococcus epidermidis RepID=C5R0Q5_STAEP
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
71_008_scaffold_242_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16265..17212)
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
DNA-directed RNA polymerase subunit alpha n=76 Tax=Staphylococcus epidermidis RepID=RPOA_STAEQ
71_008_scaffold_242_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(17289..17678)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=68 Tax=Staphylococcus epidermidis RepID=RS11_STAEQ
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_242_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(17701..18066)
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=81 Tax=Staphylococcus epidermidis RepID=RS13_STAEQ
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
71_008_scaffold_242_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18089..18202)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=92 Tax=Staphylococcus RepID=RL36_STAEQ
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_008_scaffold_242_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18234..18452)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=98 Tax=Staphylococcus RepID=IF1_STAEQ
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
71_008_scaffold_242_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18641..19288)
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase n=24 Tax=Staphylococcus epidermidis RepID=C5R0P9_STAEP
71_008_scaffold_242_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19306..20598)
DNA (1293bp) protein (431aa)
Protein translocase subunit SecY n=20 Tax=Staphylococcus epidermidis RepID=C5R0P8_STAEP
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
71_008_scaffold_242_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(20598..21038)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=70 Tax=Staphylococcus RepID=RL15_STAES
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_242_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(21055..21234)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=48 Tax=Staphylococcus RepID=RL30_STAES
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_008_scaffold_242_28

Not on your lists


comp(21251..21751)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=77 Tax=Staphylococcus epidermidis RepID=RS5_STAEQ
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
30S ribosomal protein S5 {ECO:0000313|EMBL:ETJ21627.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
71_008_scaffold_242_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(21772..22134)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=53 Tax=Staphylococcus epidermidis RepID=RL18_STAEQ
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
71_008_scaffold_242_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(22166..22702)
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=79 Tax=Staphylococcus epidermidis RepID=RL6_STAEQ
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Displaying items 1-30 of 41 in total

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