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71_008_scaffold_380

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_380_trna_2
unknown

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comp(111..181)
DNA (71bp)
transferRNA Gly
71_008_scaffold_380_trna_1
unknown

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comp(206..289)
DNA (84bp)
transferRNA Leu
71_008_scaffold_380_1
unknown

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comp(594..761)
DNA (168bp) protein (56aa)

This feature has no annotations

71_008_scaffold_380_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1047..1502)
DNA (456bp) protein (152aa)
Protein SprT-like n=3 Tax=Staphylococcus epidermidis RepID=H3WQ78_STAEP
Protein SprT-like {ECO:0000256|HAMAP-Rule:MF_00745, ECO:0000256|SAAS:SAAS00012186}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein; K03095 SprT-like protein
71_008_scaffold_380_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1495..3645)
DNA (2151bp) protein (717aa)
Tex-like protein N-terminal domain protein n=2 Tax=Staphylococcus epidermidis RepID=H3WQ77_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV20190.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
S1 RNA-binding domain-containing protein; K06959 uncharacterized protein
71_008_scaffold_380_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3937..4707)
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=9 Tax=Staphylococcus epidermidis RepID=C5QTL0_STAEP
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
RNA polymerase sigma factor SigB; K03090 RNA polymerase sigma-B factor
71_008_scaffold_380_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4682..5161)
DNA (480bp) protein (160aa)
Serine-protein kinase RsbW {ECO:0000256|HAMAP-Rule:MF_00638}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00638};; Anti-sigma-B factor {ECO:0000256|HAMAP-Rule:MF_00638}; Sigma-B negative effector RsbW {ECO:0000256|HAMAP-Rule:MF_00638}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rsbW; serine-protein kinase RsbW (EC:2.7.11.1); K04757 anti-sigma B factor [EC:2.7.11.1]
Serine-protein kinase rsbW n=4 Tax=Staphylococcus epidermidis RepID=C5QTL1_STAEP
71_008_scaffold_380_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5163..5489)
DNA (327bp) protein (109aa)
Anti-sigma-B factor antagonist n=78 Tax=Staphylococcus epidermidis RepID=RSBV_STAEQ
rsbV; anti-anti-sigma factor RsbV; K04749 anti-sigma B factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
71_008_scaffold_380_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5589..6590)
DNA (1002bp) protein (334aa)
Stage II sporulation protein E n=22 Tax=Staphylococcus epidermidis RepID=C5QTL3_STAEP
Serine phosphatase {ECO:0000313|EMBL:ESV20194.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
sigmaB regulation protein RsbU; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase)
71_008_scaffold_380_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6936..7298)
DNA (363bp) protein (121aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
PemK family transcriptional regulator; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase n=24 Tax=Staphylococcus epidermidis RepID=C5QTL4_STAEP
71_008_scaffold_380_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7295..7465)
DNA (171bp) protein (57aa)
Antitoxin MazE n=81 Tax=Staphylococcus epidermidis RepID=MAZE_STAEQ
hypothetical protein
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE60121.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
71_008_scaffold_380_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7552..8700)
DNA (1149bp) protein (383aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=4 Tax=Staphylococcus epidermidis RepID=C5QTL6_STAEP
71_008_scaffold_380_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8767..9120)
DNA (354bp) protein (118aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=4 Tax=Staphylococcus epidermidis RepID=C5QTL7_STAEP
71_008_scaffold_380_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9159..9677)
DNA (519bp) protein (173aa)
Uncharacterized protein n=6 Tax=Staphylococcus epidermidis RepID=C5QTL8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37339.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K09167 hypothetical protein
71_008_scaffold_380_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9664..11175)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=4 Tax=Staphylococcus epidermidis RepID=C5QTL9_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37340.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K08981 putative membrane protein
71_008_scaffold_380_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11162..11641)
DNA (480bp) protein (160aa)
Uncharacterized protein n=9 Tax=Staphylococcus epidermidis RepID=C5QTM0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37341.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_008_scaffold_380_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11895..13424)
DNA (1530bp) protein (510aa)
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
DEAD/DEAH box helicase n=3 Tax=Staphylococcus epidermidis RepID=H0DT86_STAEP
DEAD-box ATP dependent DNA helicase
71_008_scaffold_380_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13722..15077)
DNA (1356bp) protein (452aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=5 Tax=Staphylococcus epidermidis RepID=C5QTM2_STAEP
71_008_scaffold_380_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15089..16162)
DNA (1074bp) protein (358aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanine--D-alanine ligase; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ddl; D-alanyl-alanine synthetase A (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase n=25 Tax=Staphylococcus epidermidis RepID=C5QTM3_STAEP
71_008_scaffold_380_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16553..17203
DNA (651bp) protein (217aa)
Cell cycle family protein n=17 Tax=Staphylococcus epidermidis RepID=E6JRB0_STAEP
Putative rod shape-determining protein RodA {ECO:0000313|EMBL:EES37345.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rod shape determining protein RodA; K05837 rod shape determining protein RodA
Displaying 20 items

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