ggKbase home page

71_008_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 50 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_120_1
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..94
DNA (93bp) protein (31aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellacea
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Dialister invisus CAG:218 RepID=R5SVY2_9FIRM
phosphoglycerate mutase
71_008_scaffold_120_2
unknown

Not on your lists

107..859
DNA (753bp) protein (251aa)

This feature has no annotations

71_008_scaffold_120_3
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

904..1791
DNA (888bp) protein (296aa)
Phospholipase, patatin family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR98_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EEW96427.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
patatin
71_008_scaffold_120_4
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1784..2257
DNA (474bp) protein (158aa)
Hydrolase, P-loop family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR97_9FIRM
Hydrolase, P-loop family {ECO:0000313|EMBL:EEW96426.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
ATPase; K06925 UPF0079 ATP-binding protein
71_008_scaffold_120_5
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2241..2936
DNA (696bp) protein (232aa)
Universal bacterial protein YeaZ n=1 Tax=Dialister invisus CAG:218 RepID=R5T7M0_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CCZ54991.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
universal bacterial protein YeaZ
71_008_scaffold_120_6
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2906..3364
DNA (459bp) protein (153aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128); K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Ribosomal-protein-alanine acetyltransferase n=2 Tax=Dialister RepID=C9LR95_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CCZ54990.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_008_scaffold_120_7
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


3374..4384
DNA (1011bp) protein (337aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=742743 species="Bacteria; Firmicutes; Negativicute
probable O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1CZJ6_9FIRM
71_008_scaffold_120_8
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4408..5814
DNA (1407bp) protein (469aa)
Histidine kinase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR93_9FIRM
Histidine kinase {ECO:0000313|EMBL:EEW96422.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
ATPase
71_008_scaffold_120_9
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5807..6397
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1CZJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO63362.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 11850.;"
response regulator receiver and ANTAR domain protein; K07183 response regulator NasT
71_008_scaffold_120_10
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6423..7088
DNA (666bp) protein (222aa)
UPF0173 metal-dependent hydrolase GCWU000321_00365 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR91_9FIRM
UPF0173 metal-dependent hydrolase GCWU000321_00365 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
Predicted Zn-dependent hydrolases of the beta-lactamase fold
71_008_scaffold_120_11
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7325..8368
DNA (1044bp) protein (348aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR90_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
heat-inducible transcription repressor hrcA; K03705 heat-inducible transcriptional repressor
71_008_scaffold_120_12
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8421..9035
DNA (615bp) protein (205aa)
Protein GrpE n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR89_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
grpE; putative GrpE protein; K03687 molecular chaperone GrpE
71_008_scaffold_120_13
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9092..9937
DNA (846bp) protein (282aa)
Chaperone protein DnaK n=1 Tax=Dialister invisus CAG:218 RepID=R5SP93_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
71_008_scaffold_120_14
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9968..10969
DNA (1002bp) protein (334aa)
Chaperone protein DnaK n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR88_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
molecular chaperone DnaK; K04043 molecular chaperone DnaK
71_008_scaffold_120_15
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11116..12294
DNA (1179bp) protein (393aa)
Chaperone protein DnaJ n=1 Tax=Dialister invisus CAG:218 RepID=R5TCY3_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ
71_008_scaffold_120_16
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12380..12628)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW96415.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
71_008_scaffold_120_17
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12696..13286)
DNA (591bp) protein (197aa)
Recombination protein RecR n=2 Tax=Dialister RepID=C9LR85_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
recombination protein recR; K06187 recombination protein RecR
71_008_scaffold_120_18
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13286..13612)
DNA (327bp) protein (109aa)
Nucleoid-associated protein GCWU000321_00358 n=2 Tax=Dialister RepID=C9LR84_9FIRM
Nucleoid-associated protein BN540_00957 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein; K09747 hypothetical protein
71_008_scaffold_120_19
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13696..15516)
DNA (1821bp) protein (607aa)
dnaX; putative DNA polymerase III subunit gamma/tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunit gamma and tau n=1 Tax=Dialister sp. CAG:486 RepID=R6B2Y8_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CDA47742.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
71_008_scaffold_120_20
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15927..17315
DNA (1389bp) protein (463aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
fumC; fumarate hydratase, class II; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Dialister invisus CAG:218 RepID=R5TCX6_9FIRM
71_008_scaffold_120_21
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17468..18373
DNA (906bp) protein (302aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158]
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Dialister sp. CAG:486 RepID=R6APL1_9FIRM
71_008_scaffold_120_22
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18387..19220
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Dialister invisus CAG:218 RepID=R5SVW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ54974.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein
71_008_scaffold_120_trna_1
unknown

Not on your lists

19383..19456
DNA (74bp)
transferRNA Val
71_008_scaffold_120_23
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19555..20442
DNA (888bp) protein (296aa)
Putative membrane protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL73_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEW96074.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein
71_008_scaffold_120_24
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20555..22348
DNA (1794bp) protein (598aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Elongation factor 4 n=1 Tax=Dialister invisus CAG:218 RepID=R5SK83_9FIRM
elongation factor 4; K03596 GTP-binding protein LepA
71_008_scaffold_120_25
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22341..23486
DNA (1146bp) protein (382aa)
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Dialister sp. CAG:486 RepID=R6AHD5_9FIRM
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDA50395.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
71_008_scaffold_120_trna_3
unknown

Not on your lists

comp(23550..23621)
DNA (72bp)
transferRNA Arg
71_008_scaffold_120_26
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23712..23957
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CMW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79260.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
71_008_scaffold_120_trna_2
unknown

Not on your lists

24049..24121
DNA (73bp)
transferRNA Lys
71_008_scaffold_120_27
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24332..25672
DNA (1341bp) protein (447aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR79_9FIRM
MiaB family RNA modification protein; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Displaying items 1-30 of 50 in total

View Taxonomy