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71_008_scaffold_289

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_008_scaffold_289_1
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..105
DNA (105bp) protein (35aa)
Transcriptional regulator Fur family n=1 Tax=Dialister invisus CAG:218 RepID=R5T484_9FIRM
Transcriptional regulator Fur family {ECO:0000313|EMBL:CCZ53786.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_008_scaffold_289_2
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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359..1099
DNA (741bp) protein (247aa)
6-carboxyhexanoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00668}; EC=6.2.1.14 {ECO:0000256|HAMAP-Rule:MF_00668};; Pimeloyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_00668}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
bioW; 6-carboxyhexanoate-CoA ligase BioW (EC:6.2.1.14); K01906 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
6-carboxyhexanoate--CoA ligase n=1 Tax=Dialister sp. CAG:357 RepID=R7CQ42_9FIRM
71_008_scaffold_289_3
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1096..2262
DNA (1167bp) protein (389aa)
bioF; 8-amino-7-oxononanoate synthase BioF (EC:2.3.1.47); K00639 glycine C-acetyltransferase [EC:2.3.1.29]
8-amino-7-oxononanoate synthase n=1 Tax=Dialister sp. CAG:486 RepID=R6AV38_9FIRM
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:CDA50456.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
71_008_scaffold_289_4
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2259..2759
DNA (501bp) protein (167aa)
BioX family protein n=2 Tax=Dialister RepID=C9LQC3_9FIRM
BioX family protein {ECO:0000313|EMBL:EEW97759.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein
71_008_scaffold_289_5
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2899..4320
DNA (1422bp) protein (474aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=2 Tax=Dialister RepID=C9LQC6_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CCZ53173.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_008_scaffold_289_6
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4341..5078
DNA (738bp) protein (246aa)
uracil-DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Uracil-DNA glycosylase family 4 n=1 Tax=Dialister invisus CAG:218 RepID=R5T7U0_9FIRM
Uracil-DNA glycosylase family 4 {ECO:0000313|EMBL:CCZ53172.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_008_scaffold_289_7
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(5124..5732)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y657_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB90251.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
71_008_scaffold_289_8
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5948..6403
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Dialister invisus CAG:218 RepID=R5SH85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ53170.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_008_scaffold_289_9
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6538..6909)
DNA (372bp) protein (124aa)
Cadmium efflux system accessory protein n=1 Tax=Dialister invisus CAG:218 RepID=R5SK22_9FIRM
Cadmium efflux system accessory protein {ECO:0000313|EMBL:CCZ53463.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
regulatory protein ArsR
71_008_scaffold_289_10
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7076..7294
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW97232.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
Heavy-metal-associated domain.
71_008_scaffold_289_11
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7309..9222
DNA (1914bp) protein (638aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EEW97231.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EEW97231.1};; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
putative heavy metal ion-transporting ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-exporting ATPase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNU5_9FIRM
71_008_scaffold_289_trna_1
unknown

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comp(9328..9398)
DNA (71bp)
transferRNA Gly
71_008_scaffold_289_12
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9520..10476)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9CZM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77478.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
71_008_scaffold_289_13
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10575..12440)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9CYX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU77479.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
71_008_scaffold_289_14
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12682..13464)
DNA (783bp) protein (261aa)
carbon-nitrogen hydrolase (EC:3.5.1.-)
Hydrolase, carbon-nitrogen family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQJ6_9FIRM
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EEW97831.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
71_008_scaffold_289_15
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13689..14468
DNA (780bp) protein (260aa)
deoxyribonuclease TatD; K03424 TatD DNase family protein [EC:3.1.21.-]
Deoxyribonuclease TatD n=1 Tax=Dialister invisus CAG:218 RepID=R5SRC5_9FIRM
Deoxyribonuclease TatD {ECO:0000313|EMBL:CCZ53384.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_008_scaffold_289_16
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14481..15392
DNA (912bp) protein (304aa)
Alpha/beta hydrolase fold protein n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IVJ6_9FIRM
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EQB28537.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
alpha/beta hydrolase
71_008_scaffold_289_17
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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15550..17364
DNA (1815bp) protein (605aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNZ3_9FIRM
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EEW97279.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
71_008_scaffold_289_18
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17367..18233
DNA (867bp) protein (289aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
Pyruvate ferredoxin oxidoreductase beta subunit n=1 Tax=Dialister invisus CAG:218 RepID=R5T8A7_9FIRM
Pyruvate ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CCZ55241.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_008_scaffold_289_19
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18341..19399
DNA (1059bp) protein (353aa)
Sel1 repeat family protein n=1 Tax=Dialister invisus CAG:218 RepID=R5TDN7_9FIRM
Sel1 repeat family protein {ECO:0000313|EMBL:CCZ55242.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Sel1 domain-containing protein repeat-containing protein; K07126
71_008_scaffold_289_20
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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19502..20143
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D395_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO61986.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 11850.;"
conserved hypothetical protein TIGR00257
71_008_scaffold_289_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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20470..22548
DNA (2079bp) protein (693aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
CRISPR-associated protein cas9/csn1, subtype II/nmemi n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RUL1_9FIRM
CRISPR-associated protein Csn1
Displaying 22 items

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