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71_012_scaffold_687

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_687_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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281..664
DNA (384bp) protein (128aa)
Phage antitermination Q type 1 family n=159 Tax=Escherichia coli RepID=A7ZJG9_ECO24
ybcQ; antitermination protein
Phage antitermination Q family protein {ECO:0000313|EMBL:EMX11899.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
71_012_scaffold_687_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(853..1935)
DNA (1083bp) protein (361aa)
Outer membrane porin protein C n=78 Tax=Enterobacteriaceae RepID=H9UQ34_ECOLX
nmpC; Outer membrane porin protein C
Outer membrane porin protein ompD {ECO:0000313|EMBL:EHV63478.1}; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6B.;"
71_012_scaffold_687_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2524..2739
DNA (216bp) protein (72aa)
Lysis protein S n=35 Tax=Escherichia coli RepID=B3I4J7_ECOLX
holin protein
Lysis S family protein {ECO:0000313|EMBL:EHX30592.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
71_012_scaffold_687_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2739..3236
DNA (498bp) protein (166aa)
ybcS; DLP12 prophage; lysozyme (EC:3.2.1.17)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
Lysozyme n=90 Tax=Escherichia coli RepID=A1AAX3_ECOK1
71_012_scaffold_687_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3233..3700
DNA (468bp) protein (156aa)
Rz; Endopeptidase from phage origin (EC:3.1.3.16); K14744 putative Rz endopeptidase from lambdoid prophage DLP12 [EC:3.4.-.-]
Endopeptidase from phage origin (Lysis protein Rz) n=90 Tax=Escherichia RepID=B7N9C1_ECOLU
Bacteriophage lysis family protein {ECO:0000313|EMBL:KDW34282.1}; TaxID=1444150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S3_C2.;"
71_012_scaffold_687_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3697..3840
DNA (144bp) protein (48aa)
Predicted protein n=91 Tax=Enterobacteriaceae RepID=D7JKH8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMV23640.1}; TaxID=1116002 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli C-34666.;"
71_012_scaffold_687_7
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4192..4602)
DNA (411bp) protein (137aa)
Uncharacterized protein n=111 Tax=Enterobacteriaceae RepID=B7LBB3_ECO55
phage protein
Phage protein {ECO:0000313|EMBL:ELC20357.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
71_012_scaffold_687_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4659..4892)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=N4J1P7_ECOLX
ynfO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR11825.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
71_012_scaffold_687_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5281..7587
DNA (2307bp) protein (769aa)
Terminase large subunit n=36 Tax=Escherichia RepID=G2CX18_ECOLX
Terminase {ECO:0000313|EMBL:AIX62292.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative packaging protein
71_012_scaffold_687_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7584..7790
DNA (207bp) protein (69aa)
Lambda prophage-derived head-to-tail joining protein W n=703 Tax=root RepID=VHTJ_ECOL6
Putative Phage head-to-tail joining protein
GpW {ECO:0000313|EMBL:EGI47277.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
71_012_scaffold_687_11
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7787..8668
DNA (882bp) protein (294aa)
Portal protein B n=2 Tax=Escherichia coli RepID=T5XXX8_ECOLX
Phage portal protein, lambda family {ECO:0000313|EMBL:EFW55502.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
B; portal protein b (gpb)
71_012_scaffold_687_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8817..10058
DNA (1242bp) protein (414aa)
Site-specific recombinase, phage integrase family n=11 Tax=Enterobacteriaceae RepID=D7XH50_ECOLX
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFJ89331.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
putative integrase of prophage
71_012_scaffold_687_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10060..10317
DNA (258bp) protein (86aa)
Prophage CP4-57 regulatory protein (AlpA) n=12 Tax=Enterobacteriaceae RepID=B2U4Z1_SHIB3
prophage CP4-57 regulatory protein (AlpA)
Transcriptional regulator, AlpA family {ECO:0000313|EMBL:EFU32707.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
71_012_scaffold_687_14
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10374..10952
DNA (579bp) protein (193aa)
BRO family, N-terminal domain protein n=11 Tax=Enterobacteriaceae RepID=D7XH48_ECOLX
Prophage antirepressor {ECO:0000313|EMBL:EFW55505.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
putative antirepressor protein encoded by prophage CP-933N
71_012_scaffold_687_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10949..11512
DNA (564bp) protein (188aa)
Uncharacterized protein n=12 Tax=Escherichia coli RepID=E1JER9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFK65647.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
hypothetical protein
71_012_scaffold_687_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11616..11813
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=D7XH47_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFU32709.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
Icd-like protein
71_012_scaffold_687_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11806..11991
DNA (186bp) protein (62aa)
Uncharacterized protein n=17 Tax=Escherichia coli RepID=D7XH46_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI51059.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
hypothetical protein
71_012_scaffold_687_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11991..12182
DNA (192bp) protein (64aa)
Uncharacterized protein n=28 Tax=Escherichia coli RepID=D7XH45_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFU32711.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
hypothetical protein
71_012_scaffold_687_19
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12183..12404
DNA (222bp) protein (74aa)
Uncharacterized protein n=13 Tax=Enterobacteriaceae RepID=D7XH44_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFW55506.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
71_012_scaffold_687_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12422..12721
DNA (300bp) protein (100aa)
Uncharacterized protein n=11 Tax=Enterobacteriaceae RepID=D7XH43_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFJ89324.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
hypothetical protein
71_012_scaffold_687_21
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12718..14472
DNA (1755bp) protein (585aa)
Phage/plasmid primase, P4 family domain protein n=9 Tax=Enterobacteriaceae RepID=D7XH42_ECOLX
DNA primase , phage-associated / Replicative helicase RepA {ECO:0000313|EMBL:EFW55508.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
hypothetical protein; K06919 putative DNA primase/helicase
71_012_scaffold_687_22
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14759..15073
DNA (315bp) protein (105aa)
Uncharacterized protein n=9 Tax=Enterobacteriaceae RepID=D7XH41_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFW55509.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
hypothetical protein
71_012_scaffold_687_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15070..15354
DNA (285bp) protein (95aa)
Single-stranded DNA-binding protein n=3 Tax=Escherichia coli RepID=E9X498_ECOLX
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
putative single stranded DNA-binding protein of prophage
Displaying 23 items

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