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71_012_scaffold_13

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Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_13_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
Permease protein of ABC transporter system for sugars n=4 Tax=Bifidobacterium breve RepID=F9XZE4_BIFBU
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:KFI90127.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Permease protein of ABC transporter system for sugars
71_012_scaffold_13_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

227..1561
DNA (1335bp) protein (445aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWZ0_BIFLJ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI93930.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
family 1 extracellular solute-binding protein
71_012_scaffold_13_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1717..4137
DNA (2421bp) protein (807aa)
agl1; alpha-glucosidase (EC:3.2.1.3); K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
Glycosyl hydrolase, family 31 n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FD40_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32538.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_012_scaffold_13_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4315..6378
DNA (2064bp) protein (688aa)
Family 31 glucosidase {ECO:0000313|EMBL:KFI90088.1}; EC=3.2.1.177 {ECO:0000313|EMBL:KFI90088.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
glycosyl hydrolase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PXA0_9BIFI
71_012_scaffold_13_trna_1
unknown

Not on your lists

comp(6531..6603)
DNA (73bp)
transferRNA Ala
71_012_scaffold_13_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6764..7747)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRP6_9FIRM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32536.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
aldo/keto reductase
71_012_scaffold_13_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7845..8855)
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium breve RepID=D4BQ98_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32535.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
cebR; LacI family transcriptional regulator
71_012_scaffold_13_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9280..10533
DNA (1254bp) protein (418aa)
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z6_BIFBR
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI90085.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
71_012_scaffold_13_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10671..11903
DNA (1233bp) protein (411aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQA0_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32533.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar ABC transporter substrate-binding protein; K02025 multiple sugar transport system permease protein
71_012_scaffold_13_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11905..12786
DNA (882bp) protein (294aa)
Sugar ABC transporter, permease protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z4_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32532.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
71_012_scaffold_13_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12868..14925
DNA (2058bp) protein (686aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CR56_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32531.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
amylo-alpha-1,6-glucosidase
71_012_scaffold_13_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15436..16134)
DNA (699bp) protein (233aa)
Uncharacterized membrane-associated protein n=17 Tax=Bifidobacterium RepID=D6DAN8_BIFLN
DedA integral membrane protein {ECO:0000313|EMBL:KFI90081.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein; K03975 membrane-associated protein
71_012_scaffold_13_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16255..17079)
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4F6_BIFAD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32529.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
xylan esterase
71_012_scaffold_13_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17348..18481)
DNA (1134bp) protein (378aa)
LacI family transcription regulator, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B419E2
Transcriptional regulator {ECO:0000313|EMBL:KFI90079.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
transcriptional regulator; K02529 LacI family transcriptional regulator
71_012_scaffold_13_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18784..20439
DNA (1656bp) protein (552aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAP8_SANKS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32526.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
dipeptide ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein
71_012_scaffold_13_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20540..21520
DNA (981bp) protein (327aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAP9_SANKS
Peptide ABC transporter permease {ECO:0000313|EMBL:KFI90077.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein
71_012_scaffold_13_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21526..22476
DNA (951bp) protein (317aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RTZ8_LEIAQ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32524.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
71_012_scaffold_13_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22479..24152
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000309404C
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32523.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter
71_012_scaffold_13_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24133..25104
DNA (972bp) protein (324aa)
alpha/beta hydrolase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034C46C2
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32522.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
alpha/beta hydrolase fold protein
71_012_scaffold_13_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25246..28734
DNA (3489bp) protein (1163aa)
Cellobiose phosphorylase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAQ2_SANKS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32521.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
cellobiose phosphorylase
71_012_scaffold_13_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28814..30985
DNA (2172bp) protein (724aa)
Glycosyl hydrolase n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2TKH3_9ENTE
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32520.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
glycosyl hydrolase
71_012_scaffold_13_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31069..31986
DNA (918bp) protein (306aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
uroporphyrin-III C/tetrapyrrole; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
S-adenosylmethionine-dependent methyltransferase, YraL family n=3 Tax=Bifidobacterium bifidum RepID=E4VB05_BIFBI
71_012_scaffold_13_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31988..32488)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZA5_BIFBU
Uncharacterized protein {ECO:0000313|EMBL:KFI90070.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_012_scaffold_13_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32610..33389)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=K2HU94_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI90069.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_012_scaffold_13_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


33549..35411
DNA (1863bp) protein (621aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0F2_BIFBP
71_012_scaffold_13_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36069..37598
DNA (1530bp) protein (510aa)
Arabinose efflux permease n=4 Tax=Bifidobacterium longum RepID=B3DQG3_BIFLD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32515.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar transport protein
71_012_scaffold_13_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38486..38689
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A399_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32514.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative von Willebrand factor type A domain-containing protein
71_012_scaffold_13_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39114..39773
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7C5_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32513.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_012_scaffold_13_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40251..42092
DNA (1842bp) protein (614aa)
ABC transporter ATP-binding protein/permease (EC:3.6.3.44); K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QAF1_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32512.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_012_scaffold_13_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42193..44001
DNA (1809bp) protein (603aa)
ABC-type multidrug transport system ATPase and permease component n=13 Tax=Bifidobacterium RepID=B3DPC6_BIFLD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32511.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease; K06147 ATP-binding cassette, subfamily B, bacterial
Displaying items 1-30 of 117 in total

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