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71_012_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 139 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_24_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71..616)
DNA (546bp) protein (182aa)
protease; K05520 protease I [EC:3.2.-.-]
Intracellular protease, PfpI family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B5C3_BIFLN
Intracellular protease, PfpI family {ECO:0000313|EMBL:KFI93233.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_012_scaffold_24_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(674..2017)
DNA (1344bp) protein (448aa)
Amidohydrolase family protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BBT5_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31955.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
amidohydrolase
71_012_scaffold_24_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2077..2382)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6P0Y2_9BIFI
RNA-binding protein {ECO:0000313|EMBL:KFI93235.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein; K07574 RNA-binding protein
71_012_scaffold_24_4
unknown

Not on your lists

comp(2999..3244)
DNA (246bp) protein (82aa)

This feature has no annotations

71_012_scaffold_24_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3343..4536
DNA (1194bp) protein (398aa)
Putative oxidoreductase n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1T7_BIFLM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31953.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
oxidoreductase; K10254 myosin-crossreactive antigen
71_012_scaffold_24_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4675..4980
DNA (306bp) protein (102aa)
Ribonuclease BN n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV80_BIFLJ
Ribonuclease BN {ECO:0000313|EMBL:KFI93237.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ribonuclease BN; K07058 membrane protein
71_012_scaffold_24_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5029..5397
DNA (369bp) protein (123aa)
Ribonuclease BN-like family n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELK7_BIFBS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31952.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ribonuclease BN; K07058 membrane protein
71_012_scaffold_24_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5713..6693
DNA (981bp) protein (327aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31951.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_012_scaffold_24_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7329..8084
DNA (756bp) protein (252aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31950.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_012_scaffold_24_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8481..9968
DNA (1488bp) protein (496aa)
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:KFI93247.1}; EC=2.7.1.17 {ECO:0000313|EMBL:KFI93247.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
carbohydrate kinase; K00854 xylulokinase [EC:2.7.1.17]
Carbohydrate kinase, FGGY family protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GY51_BIFLN
71_012_scaffold_24_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10326..11225)
DNA (900bp) protein (300aa)
Bile acid:sodium symporter n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZT60_BIFLJ
Putative bile acid:sodium symporter {ECO:0000313|EMBL:KFI93248.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
bile acid:sodium symporter; K03453 bile acid:Na+ symporter, BASS family
71_012_scaffold_24_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11271..11375)
DNA (105bp) protein (35aa)
Bile acid transporter n=2 Tax=Bifidobacterium longum RepID=C2GUJ9_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31941.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Na+ dependent nucleoside transporter; K03453 bile acid:Na+ symporter, BASS family
71_012_scaffold_24_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11617..12561
DNA (945bp) protein (315aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCP0_BIFLN
71_012_scaffold_24_14
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12519..12977
DNA (459bp) protein (153aa)
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
Histidinol dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GY53_BIFLN
71_012_scaffold_24_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13128..14303
DNA (1176bp) protein (392aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hisC; histidinol-phosphate aminotransferase HisC (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Histidinol-phosphate aminotransferase n=4 Tax=Bifidobacterium bifidum RepID=E4V8F5_BIFBI
71_012_scaffold_24_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14391..14993
DNA (603bp) protein (201aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=6 Tax=Bifidobacterium RepID=E3EMT9_BIFBS
71_012_scaffold_24_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14993..15712
DNA (720bp) protein (240aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WGT9_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31937.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_012_scaffold_24_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15770..16417
DNA (648bp) protein (216aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GY57_BIFLN
71_012_scaffold_24_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16563..17288
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bifidobacterium RepID=B6XUL8_9BIFI
bifunctional 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase/N-(5'-phosphoribosyl)anthranilate isomerase
71_012_scaffold_24_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17512..18990)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HVP5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI93255.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_012_scaffold_24_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19119..20456
DNA (1338bp) protein (446aa)
Glutamine synthetase {ECO:0000313|EMBL:KFI93256.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KFI93256.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
glnA2; glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase, type I n=2 Tax=Bifidobacterium RepID=C0BSC4_9BIFI
71_012_scaffold_24_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20746..21963
DNA (1218bp) protein (406aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSC1_9BIFI
Arabinose transporter {ECO:0000313|EMBL:KFI93257.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
AraJ-like protein
71_012_scaffold_24_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22203..23123
DNA (921bp) protein (307aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ54_BIFLS
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KFI93258.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative ABC transporter permease
71_012_scaffold_24_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23120..24121
DNA (1002bp) protein (334aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ55_BIFLS
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KFI93259.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
71_012_scaffold_24_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24196..25863
DNA (1668bp) protein (556aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ56_BIFLS
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:KFI93260.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative ABC transporter substrate binding component
71_012_scaffold_24_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25954..27636
DNA (1683bp) protein (561aa)
ABC transporter {ECO:0000313|EMBL:KFI93261.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFI93261.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter related n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ57_BIFLS
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
71_012_scaffold_24_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27834..28826)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ58_BIFLS
Hemagglutinin {ECO:0000313|EMBL:KFI93262.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_012_scaffold_24_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28829..33007)
DNA (4179bp) protein (1393aa)
ATP-dependent helicase HrpA {ECO:0000313|EMBL:KFI93263.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KFI93263.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hrpA; ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
ATP-dependent helicase HrpA with DUF3418 domain n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMU8_BIFBS
71_012_scaffold_24_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33053..33697)
DNA (645bp) protein (215aa)
16S RNA methylase {ECO:0000313|EMBL:KFI93264.1}; EC=2.1.1.172 {ECO:0000313|EMBL:KFI93264.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
16S RNA methylase (EC:2.1.1.171)
16S RNA methylase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0L3_BIFBP
71_012_scaffold_24_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33866..35395
DNA (1530bp) protein (510aa)
GTPase HflX n=2 Tax=Bifidobacterium longum RepID=B3DQB1_BIFLD
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hflX; GTPase; K03665 GTP-binding protein HflX
Displaying items 1-30 of 139 in total

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