name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
71_012_scaffold_54_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(228..4169)
|
Fimbriae protein with LPXTG motif and von Willebrand factor typeA domain n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q781_BIFDB
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30349.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
fimbriae protein with LPXTG motif and von Willebrand factor typeA domain
|
|
71_012_scaffold_54_2
unknown
|
Not on your lists |
comp(4469..4618)
|
This feature has no annotations |
|
71_012_scaffold_54_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4670..5764)
|
Sortase family protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENL6_BIFBS
Sortase {ECO:0000313|EMBL:KFI93531.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
sortase
|
|
71_012_scaffold_54_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(6027..6899)
|
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Bifidobacterium dentium RepID=E0QAJ0_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30347.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein; K06997
|
|
71_012_scaffold_54_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(7257..8222)
|
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative glutamyl-queuosine tRNA(Asp) synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamyl-tRNA synthetase n=1 Tax=Bifidobacterium longum E18 RepID=V6Y3A8_BIFLN
|
|
71_012_scaffold_54_6
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8914..10167
|
LacI-type transcriptional regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q7U8_BIFDB
RbsR family transcriptional regulator/Ribose operon repressor {ECO:0000313|EMBL:KFI54003.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
LacI family transcriptional regulator
|
|
71_012_scaffold_54_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(10103..11026)
|
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BR34_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30343.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
|
|
71_012_scaffold_54_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(11023..11967)
|
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BR35_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30342.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
|
|
71_012_scaffold_54_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12037..13347)
|
ABC transporter, solute-binding protein n=5 Tax=Bacteria RepID=I3AW51_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30341.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
|
|
71_012_scaffold_54_10
unknown
|
Not on your lists |
13506..13739
|
This feature has no annotations |
|
71_012_scaffold_54_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13792..14856)
|
exo-alpha-L-arabinofuranosidase (EC:3.2.1.55)
Glycosyl hydrolase, family 43 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BR38_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30340.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
|
|
71_012_scaffold_54_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(15261..16319)
|
RbsR-type transcription regulator/Ribose operon repressor n=7 Tax=Bifidobacterium RepID=B3DPD1_BIFLD
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30339.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
RbsR family transcriptional regulator/ribose operon repressor
|
|
71_012_scaffold_54_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(16416..18653)
|
beta-xylosidase (EC:3.2.1.55)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9P5_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30338.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
|
|
71_012_scaffold_54_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18721..20436
|
Endo-1,5-alpha-L-arabinosidase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYI5_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30337.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
endo-1,5-alpha-L-arabinosidase
|
|
71_012_scaffold_54_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20562..22127
|
Beta-xylosidase {ECO:0000313|EMBL:KFI93542.1}; EC=3.2.1.99 {ECO:0000313|EMBL:KFI93542.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BR43_9BIFI
xynB1; beta-xylosidase
|
|
71_012_scaffold_54_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(22524..23258)
|
GlpF Glycerol uptake facilitator protein n=2 Tax=Bifidobacterium RepID=E4NZA3_BIFBP
Glycerol uptake facilitator protein GlpF {ECO:0000313|EMBL:KFI93543.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
glpF; glycerol uptake facilitator protein GlpF; K02440 glycerol uptake facilitator protein
|
|
71_012_scaffold_54_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(23341..24390)
|
Sortase SrtB n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KTR0_9ACTO
Fimbrial protein {ECO:0000313|EMBL:KFI93544.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
srtH; putative fimbrial associated sortase-like protein
|
|
71_012_scaffold_54_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(24617..26191)
|
Putative lactose-sensitive fimbrial protein n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2QC14_9ACTO
Fimbrial protein {ECO:0000313|EMBL:KFI93545.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
surface protein
|
|
71_012_scaffold_54_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26275..29163)
|
Outer membrane protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WZU1_CORGT
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30332.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
spaJ; putative surface-anchored fimbrial subunit
|
|
71_012_scaffold_54_trna_3
unknown
|
Not on your lists |
comp(30105..30178)
|
transferRNA Lys
|
|
71_012_scaffold_54_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(30453..30899)
|
50S ribosomal protein L9 n=4 Tax=Bifidobacterium dentium RepID=D2Q6P8_BIFDB
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
|
|
71_012_scaffold_54_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(30920..31198)
|
30S ribosomal protein S18 n=3 Tax=Bifidobacterium RepID=RS18_BIFAA
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
|
|
71_012_scaffold_54_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(31230..31862)
|
Single-stranded DNA-binding protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FDE6_9BIFI
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
single-stranded DNA-binding protein
|
|
71_012_scaffold_54_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(31910..32206)
|
30S ribosomal protein S6 n=12 Tax=Gardnerella vaginalis RepID=E3D771_GARV3
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
rpsF; 30S ribosomal protein S6
|
|
71_012_scaffold_54_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
32405..33418
|
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KFI93552.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KFI93552.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSY3_9BIFI
|
|
71_012_scaffold_54_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
33536..34714
|
UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase [EC:5.4.99.9]
UDP-galactopyranose mutase n=1 Tax=Bifidobacterium longum E18 RepID=V6XYY5_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30325.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
|
|
71_012_scaffold_54_26
unknown
|
Not on your lists |
comp(34639..34914)
|
This feature has no annotations |
|
71_012_scaffold_54_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
34916..35395
|
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobact
rlmH; rRNA large subunit m3Psi methyltransferase RlmH (EC:2.1.-.-); K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=4 Tax=Bifidobacterium breve RepID=F6C8E4_BIFBA
|
|
71_012_scaffold_54_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(35690..36388)
|
Uncharacterized protein {ECO:0000313|EMBL:KFI93555.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
|
|
71_012_scaffold_54_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
36920..37336
|
glycerophosphoryl diesterphosphodiesterase n=1 Tax=Scardovia inopinata RepID=UPI0001D0A048
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30322.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
|