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71_012_scaffold_56_26

Organism: 71_012_Bifidobacterium_scardovii_65_73

near complete RP 51 / 55 MC: 8 BSCG 50 / 51 MC: 4 ASCG 14 / 38
Location: 30939..31970

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, extracellular substrate binding protein, probably Alginate uptake porter n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4ILU7_BIFAP similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 355.0
  • Bit_score: 411
  • Evalue 8.20e-112
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30119.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 327.0
  • Bit_score: 671
  • Evalue 6.20e-190
ABC transporter, extracellular substrate binding protein, probably Alginate uptake porter similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 355.0
  • Bit_score: 411
  • Evalue 2.60e-112

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Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGAGGTTATCGATTAAGAAGTTGCTGGTCGCGGTCGCCGCGTGCTCCATGGTGCTGCCGCTGGTGGCATGCGGGCAGAGCGGCGATTCCGGTGCCAAGGACGCCAACGGAAAGCCGATCGTCAAAATCGCCGTGTCCAAGCACTCCCTGACCAAGAAGATGTCCGAGATGAAGTGGCCCAAGGAGTTGGAGGCCGCCTGCGACTGCACCATCGAGTGGCAGGAGGTCAGCTCGGACTGGGATCAGAAGAAGCAGGCCATGTTCACCGCCGGCGAGATCCCCGACATGATCCTCAAGGGCGTGTACCTGAACGATATGGCCACCTATGGCTCCCTGTTCGAGGACCTCACCGACGATATCGGCAAGATCCAGGTGCTGCCCTCCGACAAGAAGGGATACTGGCCCAAGACCGTCTCCCGCAGGTACATCAACAAACAGTGGCTGGACAAGCTGGGCCTGAGCGTCCCCACGAACTGGGACGAGCTGTACAACGTGCTCAAGGCCTTCAAGACGCAGGACCCGAACGGCAACGGTCAGGCCGATGAGATCCCGATGGACTTCATTTCCCCCGGGACCGGCGGTTTCGGCGACTTCCAGCCGGTGATCCTGCTCGGCAGCCTGGGTCTGTCCTACACCACCTCGGACGGCTACGGCGGGTCCGGATACTACGTGCAGGACGGCAAGGTCGGCACCTTCCTGACCGACGACCGGTACAAGACCCTGGTCGAGTTCCTGAATAAGCTGTGGTCCGACGGTCTGATCAACAAGGAAGCGTTCACCCACGACTACTCGCAGTCCCAGGCCACGACCCGCGGCGACGGCGACACCGCCAAGGTCGGGTTCACCTGGGGATATTCCGCATCGGACCGCTTCGGCGTCAAGCTGGCGGACCAGTACGTGTCGATGGGGCAGATCAAGCACGACGCCAACCAGACGGAGAAGCTGTACTACGATTACGCGAACGACCGTACCGTCTACTCGCAGAGCGCATTGGCCATTCCGCGAACACCAAGTATCTGGATCAGTGCCTGA
PROTEIN sequence
Length: 344
MRLSIKKLLVAVAACSMVLPLVACGQSGDSGAKDANGKPIVKIAVSKHSLTKKMSEMKWPKELEAACDCTIEWQEVSSDWDQKKQAMFTAGEIPDMILKGVYLNDMATYGSLFEDLTDDIGKIQVLPSDKKGYWPKTVSRRYINKQWLDKLGLSVPTNWDELYNVLKAFKTQDPNGNGQADEIPMDFISPGTGGFGDFQPVILLGSLGLSYTTSDGYGGSGYYVQDGKVGTFLTDDRYKTLVEFLNKLWSDGLINKEAFTHDYSQSQATTRGDGDTAKVGFTWGYSASDRFGVKLADQYVSMGQIKHDANQTEKLYYDYANDRTVYSQSALAIPRTPSIWISA*