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71_012_scaffold_38

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Displaying items 1-30 of 124 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_38_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(406..1581)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UIB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC66933.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
major facilitator superfamily protein
71_012_scaffold_38_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1820..2713)
DNA (894bp) protein (298aa)
Protein-export membrane protein SecF n=4 Tax=Veillonella parvula RepID=D1BLM5_VEIPT
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
71_012_scaffold_38_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2710..3984)
DNA (1275bp) protein (425aa)
Protein translocase subunit SecD n=3 Tax=Veillonella parvula RepID=T0T7B8_9FIRM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD
71_012_scaffold_38_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4003..4569)
DNA (567bp) protein (189aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase n=4 Tax=Veillonella RepID=T0T058_9FIRM
71_012_scaffold_38_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4569..4859)
DNA (291bp) protein (97aa)
Preprotein translocase, YajC subunit n=6 Tax=Veillonella RepID=D1BLM2_VEIPT
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EFB85694.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
71_012_scaffold_38_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4937..6052)
DNA (1116bp) protein (372aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=2 Tax=Veillonella RepID=T0UIB3_9FIRM
71_012_scaffold_38_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6061..7086)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQU5_9FIRM
71_012_scaffold_38_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7098..8888)
DNA (1791bp) protein (597aa)
SpoIID/LytB domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L227_9FIRM
SpoIID/LytB domain protein {ECO:0000313|EMBL:EGL76719.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
SpoIID/LytB domain-containing protein
71_012_scaffold_38_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8891..9895)
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Veillonella parvula RepID=T0T055_9FIRM
71_012_scaffold_38_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9898..10506)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L229_9FIRM
71_012_scaffold_38_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10506..11000)
DNA (495bp) protein (165aa)
crossover junction endodeoxyribonuclease RuvC; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Crossover junction endodeoxyribonuclease RuvC n=6 Tax=Veillonella RepID=D1BLL6_VEIPT
71_012_scaffold_38_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11204..11941)
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein HMPREF9323_1679 n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L231_9FIRM
Probable transcriptional regulatory protein HMPREF9323_1679 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
71_012_scaffold_38_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11951..12523)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB85686.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
71_012_scaffold_38_14
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12639..13940)
DNA (1302bp) protein (434aa)
glutathionylspermidine synthase; K01917 glutathionylspermidine synthase [EC:6.3.1.8]
Uncharacterized protein n=2 Tax=Veillonella RepID=D1YQT8_9FIRM
Putative glutathionylspermidine synthetase {ECO:0000313|EMBL:EFG22304.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
71_012_scaffold_38_15
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13955..14515)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=D1YQT7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFG22305.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
hypothetical protein
71_012_scaffold_38_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14527..14958)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=C4FRR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEP65056.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
hypothetical protein; K08989 putative membrane protein
71_012_scaffold_38_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14995..16059)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=D1YQT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB85682.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
71_012_scaffold_38_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16171..17001)
DNA (831bp) protein (277aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Veillonella RepID=D1YQT4_9FIRM
71_012_scaffold_38_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17122..17619)
DNA (498bp) protein (166aa)
UPI0003D5AF54 related cluster n=1 Tax=unknown RepID=UPI0003D5AF54
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM
71_012_scaffold_38_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17619..18026)
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Veillonella parvula RepID=D1BLK5_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI99069.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
71_012_scaffold_38_21
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18041..18268)
DNA (228bp) protein (76aa)
UPF0109 protein Vpar_0578 n=11 Tax=Veillonella RepID=D1BLK4_VEIPT
RNA-binding protein; K06960
UPF0109 protein HMPREF0870_01203 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
71_012_scaffold_38_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18290..18553)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=10 Tax=Veillonella RepID=D1BLK3_VEIPT
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
71_012_scaffold_38_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18614..19966)
DNA (1353bp) protein (451aa)
UPI0003D677DE related cluster n=1 Tax=unknown RepID=UPI0003D677DE
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
signal recognition particle protein; K03106 signal recognition particle subunit SRP54
71_012_scaffold_38_24
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19956..20291)
DNA (336bp) protein (112aa)
UPF0122 protein HSIVP1_1951 n=4 Tax=Veillonella RepID=T0T770_9FIRM
UPF0122 protein Q619_VDC00514G0021 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
helix-turn-helix protein YlxM/p13 family protein; K09787 hypothetical protein
71_012_scaffold_38_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20601..21926
DNA (1326bp) protein (442aa)
Putative Dihydrolipoamide dehydrogenase Mercuric ion reductase family {ECO:0000313|EMBL:EQC66906.1}; EC=1.16.1.1 {ECO:0000313|EMBL:EQC66906.1};; EC=1.8.1.4 {ECO:0000313|EMBL:EQC66906.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Putative Dihydrolipoamide dehydrogenase Mercuric ion reductase family n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T783_9FIRM
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
71_012_scaffold_38_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22122..22649)
DNA (528bp) protein (176aa)
Membrane spanning protein n=2 Tax=Veillonella parvula HSIVP1 RepID=T0T043_9FIRM
Membrane spanning protein {ECO:0000313|EMBL:EQC66905.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
hypothetical protein
71_012_scaffold_38_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22857..25031)
DNA (2175bp) protein (725aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EQC66904.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EQC66904.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UAI7_9FIRM
71_012_scaffold_38_28
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25439..26092
DNA (654bp) protein (218aa)
YigZ family protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L249_9FIRM
YigZ family protein {ECO:0000313|EMBL:EGL76675.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
71_012_scaffold_38_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26116..26301)
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=T0T765_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC66902.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
hypothetical protein
71_012_scaffold_38_30
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26497..27387
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=5 Tax=Veillonella RepID=T0T779_9FIRM
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:EFG22317.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
LysR family transcriptional regulator
Displaying items 1-30 of 124 in total

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