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71_012_scaffold_209

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_209_1
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(544..2937)
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPW6_9FIRM
71_012_scaffold_209_2
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2950..4029)
DNA (1080bp) protein (360aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Peptostreptococcus RepID=L1MG48_9FIRM
71_012_scaffold_209_3
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4453..5235)
DNA (783bp) protein (261aa)
RNA methyltransferase, TrmH family n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPW4_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFD05833.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
RNA methylase
71_012_scaffold_209_4
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5247..5900)
DNA (654bp) protein (218aa)
TrkA N-terminal domain protein n=3 Tax=Peptostreptococcus RepID=D3MPW3_9FIRM
TrkA-N domain protein {ECO:0000313|EMBL:CCY50346.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
cation transport protein; K03499 trk system potassium uptake protein TrkA
71_012_scaffold_209_5
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5998..7365)
DNA (1368bp) protein (456aa)
Potassium uptake protein, TrkH family n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MFL4_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EKX90027.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
cation transport protein; K03498 trk system potassium uptake protein TrkH
71_012_scaffold_209_6
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7581..9644)
DNA (2064bp) protein (688aa)
Sulfatase domain protein n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5JCC5_9FIRM
Sulfatase domain protein {ECO:0000313|EMBL:CCY50344.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
71_012_scaffold_209_7
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9647..10606)
DNA (960bp) protein (320aa)
Surface surface protein n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5J6Z1_9FIRM
Surface surface protein {ECO:0000313|EMBL:CCY50343.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
surface protein
71_012_scaffold_209_8
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10891..11211)
DNA (321bp) protein (107aa)
Preprotein translocase, YajC subunit n=3 Tax=Peptostreptococcus RepID=D3MPV8_9FIRM
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EKX90023.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
protein translocase subunit; K03210 preprotein translocase subunit YajC
71_012_scaffold_209_9
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11267..12385)
DNA (1119bp) protein (373aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MPV7_9FIRM
71_012_scaffold_209_10
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12482..13504)
DNA (1023bp) protein (341aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MG38_9FIRM
71_012_scaffold_209_11
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13523..14539)
DNA (1017bp) protein (339aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Peptostreptococcus RepID=D3MPV5_9FIRM
71_012_scaffold_209_12
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14553..15176)
DNA (624bp) protein (208aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MFI5_9FIRM
71_012_scaffold_209_13
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15312..15806)
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
ruvC; Holliday junction resolvase; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Peptostreptococcus RepID=L1MFK4_9FIRM
71_012_scaffold_209_14
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16198..16782
DNA (585bp) protein (195aa)
DNA-binding helix-turn-helix protein n=2 Tax=Peptostreptococcus RepID=L1MGF5_9FIRM
Putative DNA-binding protein {ECO:0000313|EMBL:CCY49484.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
DNA-binding protein
71_012_scaffold_209_15
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16942..17763)
DNA (822bp) protein (274aa)
3D domain protein n=2 Tax=Peptostreptococcus RepID=L1MG33_9FIRM
3D domain protein {ECO:0000313|EMBL:EKX90015.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
hypothetical protein
71_012_scaffold_209_16
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18025..18729
DNA (705bp) protein (235aa)
similar to protein O-D-mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
Uncharacterized protein n=2 Tax=Peptostreptococcus RepID=D3MPV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY49482.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
71_012_scaffold_209_17
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18746..19063
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Peptostreptococcus RepID=D3MPU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFD05840.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
lipoprotein
71_012_scaffold_209_18
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19117..19776)
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=3 Tax=Peptostreptococcus RepID=D3MPU8_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CCY49480.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
TetR/AcrR family transcriptional regulator
71_012_scaffold_209_19
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19959..20315)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=3 Tax=Peptostreptococcus RepID=D3MPU7_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
71_012_scaffold_209_20
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20340..20537)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=3 Tax=Peptostreptococcus RepID=D3MPU6_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
71_012_scaffold_209_21
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20564..20965)
DNA (402bp) protein (134aa)
Translation initiation factor IF-3 n=3 Tax=Peptostreptococcus RepID=D3MPU5_9FIRM
Translation initiation factor IF-3 {ECO:0000256|RuleBase:RU000646}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
71_012_scaffold_209_22
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21492..22358)
DNA (867bp) protein (289aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=2 Tax=Peptostreptococcus RepID=L1MFH8_9FIRM
71_012_scaffold_209_23
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22592..23209
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Peptostreptococcus RepID=L1MFJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY49520.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
hypothetical protein
71_012_scaffold_209_trna_1
unknown

Not on your lists

23267..23350
DNA (84bp)
transferRNA Leu
71_012_scaffold_209_24
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24251..24451
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Peptostreptococcus RepID=L1MG03_9FIRM
Putative phage-associated protein {ECO:0000313|EMBL:CCY47595.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
hypothetical protein
71_012_scaffold_209_25
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(24465..25106)
DNA (642bp) protein (214aa)
Exo-glucosaminidase lytG {ECO:0000313|EMBL:CRH64684.1}; EC=3.2.1.- {ECO:0000313|EMBL:CRH64684.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028940F4
N-acetylmuramoyl-L-alanine amidase
Displaying 26 items

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