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71_012_scaffold_216

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_216_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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248..1072
DNA (825bp) protein (275aa)
TcdA-E operon negative regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp14 RepID=S2QTX5_LACPA
TcdA-E operon negative regulator {ECO:0000313|EMBL:EPC62746.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
dtxA; hypothetical protein
71_012_scaffold_216_2
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1412..2476
DNA (1065bp) protein (355aa)
Peptide chain release factor 1 n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MSF2_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
71_012_scaffold_216_3
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2498..3547
DNA (1050bp) protein (350aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
SUA5 protein n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5J6M7_9FIRM
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
71_012_scaffold_216_4
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3569..4015
DNA (447bp) protein (149aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EFD04901.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EFD04901.1};; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
rpiB; ribose 5-phosphate isomerase b/allose 6-phosphate isomerase (EC:5.3.1.6 5.3.1.-); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose-5-phosphate isomerase B n=2 Tax=Peptostreptococcus RepID=D3MSF0_9FIRM
71_012_scaffold_216_5
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4061..4690
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
upp; uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase n=2 Tax=Peptostreptococcus RepID=L1MHK1_9FIRM
71_012_scaffold_216_6
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5036..6571
DNA (1536bp) protein (512aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MSE7_9FIRM
71_012_scaffold_216_7
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7111..8490)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 35098.;"
hk04; Sensor protein (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CH91_9FIRM
71_012_scaffold_216_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8481..9140)
DNA (660bp) protein (220aa)
Response regulator receiver domain protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S8K4_FINMA
Response regulator receiver domain protein {ECO:0000313|EMBL:EFH93132.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
two component transcriptional regulator
71_012_scaffold_216_9
Anaerococcus tetradius, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9173..9913)
DNA (741bp) protein (247aa)
Antibiotic ABC transporter protein MutG n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CH93_9FIRM
Antibiotic ABC transporter protein MutG {ECO:0000313|EMBL:EEI83067.1}; TaxID=525255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus tetradius ATCC 35098.;"
MutG
71_012_scaffold_216_10
Eremococcus coleocola, Eremococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9913..10653)
DNA (741bp) protein (247aa)
Mutacin ABC transporter protein, MutE n=1 Tax=Eremococcus coleocola ACS-139-V-Col8 RepID=E4KR95_9LACT
Mutacin ABC transporter protein, MutE {ECO:0000313|EMBL:EFR30527.1}; TaxID=908337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Eremococcus.;" source="Eremococcus coleocola ACS-139-V-Col8.;"
protein MutE
71_012_scaffold_216_11
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10657..11358)
DNA (702bp) protein (234aa)
lantibiotic protection ABC transporter, ATP-binding subunit (EC:3.6.3.25)
Mutacin ABC transporter, ATP-binding protein MutF n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GTV6_9FIRM
Mutacin ABC transporter, ATP-binding protein MutF {ECO:0000313|EMBL:EGC82710.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
71_012_scaffold_216_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11472..11666)
DNA (195bp) protein (65aa)
Phage integrase family protein n=1 Tax=Clostridium difficile P59 RepID=T4T2U2_CLODI
Putative integrase {ECO:0000313|EMBL:CCL21779.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
integrase family protein
71_012_scaffold_216_13
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11736..13025
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MGK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKX90388.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
hypothetical protein
71_012_scaffold_216_14
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13174..13383
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E378_9FIRM
Contig000085, whole genome shotgun sequence {ECO:0000313|EMBL:KIS07944.1}; TaxID=1381085 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus Sz16.;"
transcriptional regulator
71_012_scaffold_216_15
Firmicutes bacterium M10-2, Firmicutes, Bacteria

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13418..16654
DNA (3237bp) protein (1079aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LV42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62181.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
helicase/SNF2 domain-containing protein
71_012_scaffold_216_16
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

16669..17322
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LTR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62180.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
hypothetical protein
71_012_scaffold_216_17
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17322..19307
DNA (1986bp) protein (662aa)
type III restriction-modification system, methylase subunit; K07316 adenine-specific DNA-methyltransferase [EC:2.1.1.72]
hypothetical protein n=1 Tax=Acinetobacter radioresistens RepID=UPI0002FF2C62
Uncharacterized protein {ECO:0000313|EMBL:KGN02122.1}; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4570.;"
71_012_scaffold_216_18
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

19320..22382
DNA (3063bp) protein (1021aa)
type III restriction-modification system, restriction endonuclease subunit; K01156 type III restriction enzyme [EC:3.1.21.5]
Type III restriction enzyme n=1 Tax=Firmicutes bacterium M10-2 RepID=R9M2Q6_9FIRM
Type III restriction enzyme {ECO:0000313|EMBL:EOS62177.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
71_012_scaffold_216_19
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22640..23305)
DNA (666bp) protein (222aa)
Fic/DOC family protein n=1 Tax=Eubacterium sp. AS15 RepID=J4UBI4_9FIRM
Fic/DOC family protein {ECO:0000313|EMBL:EJP19922.1}; TaxID=936556 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
phosphoribosylaminoimidazole-succinocarboxamide synthetase
71_012_scaffold_216_20
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23972..24187
DNA (216bp) protein (72aa)
Transcriptional regulator XRE family n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5J0K6_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCY48103.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
XRE family transcriptional regulator
71_012_scaffold_216_21
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24255..24452
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Peptostreptococcus anaerobius RepID=L1MHJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKX90386.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
ORF6N domain-containing protein
Displaying 21 items

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