ggKbase home page

71_012_scaffold_328

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_328_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1006)
DNA (1005bp) protein (335aa)
Glycosyltransferase involved in cell wall biogenesis n=2 Tax=Bifidobacterium bifidum RepID=E3EPE1_BIFBS
glycosyltransferase family protein
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:ADO52268.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_012_scaffold_328_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1175..2227
DNA (1053bp) protein (351aa)
integrase n=1 Tax=Bifidobacterium bifidum RepID=UPI000379875D
IS30 family transposase
IS30 family transposase {ECO:0000313|EMBL:KFI42843.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
71_012_scaffold_328_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2314..3681)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MXR6_BIFBI
hypothetical protein; K07133
Uncharacterized protein {ECO:0000313|EMBL:EKF16773.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
71_012_scaffold_328_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4412..4591)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8ML63_BIFLS
hypothetical protein
Inner membrane protein YccF {ECO:0000313|EMBL:CEF15273.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
71_012_scaffold_328_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4854..4964
DNA (111bp) protein (37aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=I3WFK4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95663.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
71_012_scaffold_328_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5195..7246
DNA (2052bp) protein (684aa)
Multidrug resistance transporter, Major Facilitator Superfamily n=2 Tax=Bifidobacterium bifidum RepID=E3EPJ8_BIFBS
multidrug resistance transporter
Multidrug resistance transporter, Major Facilitator Superfamily {ECO:0000313|EMBL:ADO52325.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_012_scaffold_328_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7670..7924)
DNA (255bp) protein (85aa)
Putative transposase for insertion sequenceelement IS986/IS6110 n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFK6_BIFBI
putative transposase for insertion sequenceelement IS986/IS6110
Putative transposase for insertion sequenceelement IS986/IS6110 {ECO:0000313|EMBL:AFL03669.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
71_012_scaffold_328_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8076..8306
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAM4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI84370.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
insertion sequence IS5376, putative ATP-binding protein
71_012_scaffold_328_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8730..9050)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPK1_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52328.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_012_scaffold_328_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9069..9389
DNA (321bp) protein (107aa)
ABC transporter ATP-binding protein HlyB family n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GDT4_9BIFI
ABC transporter ATP-binding protein HlyB family {ECO:0000313|EMBL:CDB23598.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
ABC transporter ATP-binding protein/permease
71_012_scaffold_328_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9491..9898)
DNA (408bp) protein (136aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFK9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE51046.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
71_012_scaffold_328_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10235..12688
DNA (2454bp) protein (818aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
glgP1; glycogen/starch/alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Phosphorylase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPK4_BIFBS
71_012_scaffold_328_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13407..13628)
DNA (222bp) protein (74aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WFL2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE51042.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
71_012_scaffold_328_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13815..14600
DNA (786bp) protein (262aa)
Peptidase, S54 family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CIK2_BIFBI
Membrane spanning protein {ECO:0000313|EMBL:KFI42208.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
membrane spanning protein
71_012_scaffold_328_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14597..15160
DNA (564bp) protein (188aa)
Integrase n=2 Tax=Bifidobacterium bifidum RepID=E3EPK7_BIFBS
IS3 family transposase {ECO:0000313|EMBL:KFI42209.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Integrase
Displaying 15 items

View Taxonomy